Pairwise Alignments

Query, 251 a.a., vitamin B12 import ATP-binding protein BtuD from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ATP-binding cassette domain-containing protein from Pseudomonas sp. SVBP6

 Score =  115 bits (288), Expect = 9e-31
 Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 16/240 (6%)

Query: 6   SLQVDSRLLPLSLQANAGEVWHVIGPNGCGKSTLLAALAGMI-PFSGSVQVDGLDVSQAS 64
           SL+    L P++ Q  AGE+  +IGPNG GKSTLL+ ++G + P SG +++ G +++   
Sbjct: 8   SLEQPFALAPINAQIKAGELLGLIGPNGAGKSTLLSLISGYLQPDSGRIELLGRELAAYL 67

Query: 65  LSELARHRAYLAQNNKPSFQLHVFQYLALSVPANVALECSEVASEIDQISRLLNIDDKLH 124
             +LAR RA + Q    +F   V +++ L    +    C+ +   +D       I   L 
Sbjct: 68  PGQLARRRALVTQQMDSAFDWQVDEFIRLG-QQHPGEPCAGIVDALD-------IRHLLG 119

Query: 125 RSIHQLSGGEWQRVRLAGSC--LQVSPVLNP----SARLLIWDEPAAPLDIAQESLLYRL 178
           R +  LSGGE QRV +A +   L +SP  +        LL+ DEP + LDI Q+  L R+
Sbjct: 120 RGVLSLSGGELQRVTIARAMNQLAISPTTDAWRDGQGCLLLLDEPTSALDIGQQQNLMRV 179

Query: 179 IERMAGQG-LTVIMANHDLNRTLRHADQVLLLSRGVLYRAGSAKEVLTQEVLQSVFGTSI 237
           + ++A    + V+   HDLN   R+ D++ LL  G L  +G+  +VL+++ +  VF   +
Sbjct: 180 LRKLASSARIAVVCVLHDLNLAARYCDRLWLLESGRLCASGAPAQVLSEQRIARVFAAQV 239