Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  183 bits (464), Expect = 6e-51
 Identities = 106/285 (37%), Positives = 167/285 (58%), Gaps = 6/285 (2%)

Query: 50  WSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVI 109
           W + ++ +VW +R+PR+L  A++GA LA+ GA LQ +  N LA+P ++GV+ GA++  VI
Sbjct: 53  WPAGQEHIVWLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVI 112

Query: 110 LLLFFPSLNSPVAFMAAAVLGALLFTLL-LVVMARKLRLTTARLLLVGVALGILSGAVVT 168
           ++L    +   +    AA +GALL  L+ L V +R  RL + RLLL GVA+  +  A   
Sbjct: 113 VVLHVGEVIGLLTLPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAAN 172

Query: 169 WAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGGV---LDKLMLGE 225
              +  D      +M+W++G +    W   LL++    V++ L L  G+   L+ LM GE
Sbjct: 173 LLLFMGDHRAASAVMFWMLGGLGLARW--ELLAVPTATVLLGLGLLLGMARPLNALMAGE 230

Query: 226 GHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPL 285
             A  LG++   VR ++ L  +L+ G  V++ G IGFVGL+VPH+ R  +G+E+R LLP+
Sbjct: 231 QTAVTLGLNARNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPV 290

Query: 286 SALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
             L G+L LV  D+ AR  +   +LP+GV T  +G   FI ++ R
Sbjct: 291 CVLLGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335