Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (437), Expect = 8e-48
 Identities = 108/300 (36%), Positives = 170/300 (56%), Gaps = 6/300 (2%)

Query: 34  VLYLLVGELWLSPFSAWSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAE 93
           VL +L  +LW + +     +++ +VW  RL R L AA  GA LA  G  LQ LL N LA+
Sbjct: 31  VLQVLANKLWAASY-VLDPIDEGVVWNYRLTRALVAAACGAGLATCGVILQSLLRNPLAD 89

Query: 94  PGVVGVSGGASVAMVILLLFFPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLT--TAR 151
           P ++G+S GAS   V++ L        ++  A A +GA+    L++++AR       T +
Sbjct: 90  PYLLGISAGASTGAVLVALIGVG-GGLISLSAGAFVGAMAAFALVILLARASGSASGTGQ 148

Query: 152 LLLVGVALGILSGAVVTWAFYFS-DDLGLRQLMYWLMGSVAGVSWYQHLLSL-VAVPVVI 209
           ++L G+A   L  A+  +    S      R +++WL+G+++GV W    L++ VAV  + 
Sbjct: 149 IILAGIAGSQLFNALTAFLITKSASSEQARGILFWLLGNLSGVRWPSVWLAVPVAVAGLA 208

Query: 210 WLVLQGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPH 269
             +     LD    G   A  LGI + RV++ L+   AL+    V++ G IGFVGLV+PH
Sbjct: 209 VCLWHRRALDAFTFGSDSAASLGIPVRRVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPH 268

Query: 270 LLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLV 329
            +RL LG+ +  LLP SAL GAL L++AD+++R  +    +P+GVVT  +GAP+F  +L+
Sbjct: 269 AVRLLLGTGHSRLLPASALGGALFLIAADVLSRTLIKGQVIPVGVVTALVGAPVFALILI 328