Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., iron-siderophore ABC transporter permease from Pseudomonas simiae WCS417

 Score =  171 bits (434), Expect = 2e-47
 Identities = 107/303 (35%), Positives = 173/303 (57%), Gaps = 11/303 (3%)

Query: 34  VLYLLVGELWLSPFSAWSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAE 93
           +L LL G L  S  SA    +Q ++W +RLP  L A ++G +L++AGA +Q +L N LA 
Sbjct: 50  LLALLDGILHPSHLSA---TDQVIIWNVRLPYALMAVLVGCALSLAGAEMQAILNNPLAS 106

Query: 94  PGVVGVSGGASVAMVILLLF-----FPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLT 148
           P  +GVS  A++   ++++F     + S N+ ++  A     A +F  LL  M+R     
Sbjct: 107 PFTLGVSSAAALGASLVIVFPVTTLWVSANTAISISAFIFAAASVF--LLQAMSRLRGAG 164

Query: 149 TARLLLVGVALGILSGAVVTWAFYFSDDLGLRQLMYWLMGSVAGVSWYQ-HLLSLVAVPV 207
              L+L G+AL     AVV      + +  L+QL++W +GSV   +W +  +L+LV   V
Sbjct: 165 VESLVLFGIALVFSCNAVVALLQLVATEDVLQQLVFWTLGSVTRANWDKLGILALVVAVV 224

Query: 208 VIWLVLQGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVV 267
           + +       L  L +GE  A+  G+D+ R+R+  +L I+LL   +VA  G IGF+GLV 
Sbjct: 225 LPFSFAAAPRLTLLRMGEDRAQSFGVDVKRLRFFSLLRISLLSATAVAFVGTIGFIGLVG 284

Query: 268 PHLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWM 327
           PH+ R+ +G + R LLP SAL GALLL  + + ++L +    +P+G+VT  +G PIF+ +
Sbjct: 285 PHIARILVGEDQRFLLPASALTGALLLALSSIASKLIMPGVIVPVGIVTALVGVPIFVVL 344

Query: 328 LVR 330
           + +
Sbjct: 345 VFK 347