Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC-type Fe3+-siderophore transport system, permease component from Escherichia coli ECRC98

 Score =  145 bits (365), Expect = 2e-39
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 39  VGELWLSPFSAWSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVG 98
           VG    +P +  S+  + +V ++RLPR++ A + GA L +AGA +Q +  N LA+PG++G
Sbjct: 52  VGRALFAPENV-STDARYIVQDIRLPRVIMALLCGAMLGMAGAAMQSIARNGLADPGLIG 110

Query: 99  VSGGASVAMVILLLFFPSLNS---PVAFMAAAVLGALLFTLLLVVMARKLRLTTARLLLV 155
           V  G SVA++ L+  FP L     PVA +A    G LL  L+++  AR++  +  R +L+
Sbjct: 111 VKEGCSVAVLWLIFQFPMLGMFWRPVAGLA----GGLLVALIVIFCAREI--SRPRFVLI 164

Query: 156 GVALGILSGAVVTWAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLV-AVPVVIWLVLQ 214
           G+ +     A +      +D   ++  + WL GS+   +W    +S    +P  + L+  
Sbjct: 165 GIGVSWFFAAGIGVFMTTADVRDVQTALMWLSGSLHAANWMLVGISACWMLPAALLLLFT 224

Query: 215 GGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLT 274
               D  +LG   A  LG++  R+    + A  +L    V+  G IGFVGL+ PH+ R  
Sbjct: 225 ARTADIALLGHQVATGLGVNSSRLALLRVAAPIILTAVCVSCVGNIGFVGLIAPHISRFI 284

Query: 275 LGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVRNHDS 334
           L      LL  SA+ GALL++ AD I RLA    +LP G++ + +G P F+ +L +  +S
Sbjct: 285 LRGGQTTLLLGSAVSGALLVILADSIGRLAFLPLQLPAGIIISLIGGPFFLLLLWQRRNS 344