Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., sodium:dicarboxylate symporter from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 5e-36
 Identities = 105/411 (25%), Positives = 203/411 (49%), Gaps = 17/411 (4%)

Query: 46  QVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISA 105
           Q++ GL+ G A G AL   L E  P + + L   A  G+ ++ L+KM+++P+V   M+  
Sbjct: 11  QIMIGLLAGIAIG-ALLHQLPESRPWLVDNLLQPA--GDIFIKLMKMIVVPIVFACMVVG 67

Query: 106 VVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAALE 165
           +       SLG+I + ++G     T ++ ++G+++    G   +        +   A++ 
Sbjct: 68  IAGHGDGKSLGRIGARSLGYFFCITTLAIIVGLVL----GNLLKPGAGTELSSLHAASIT 123

Query: 166 SRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQELE 225
              S+ A  ++ QI++  IP N    ++     S+++V+ F V+ G+   ++ A++++  
Sbjct: 124 LPTSSGAGHSLGQIIVGIIPDNV---ISAMAQGSLLSVLFFAVMFGLGVARLPAERKD-- 178

Query: 226 TPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVAIA 285
            P+   +      + ++  MIMA +P G+  ++A  VA      +L L   I+ SYV+IA
Sbjct: 179 -PVIALLRGVSDAMFKVTSMIMAYSPIGVFGMIAVTVANFGFGSLLPLAKLIMVSYVSIA 237

Query: 286 -LMFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVPPAIA 344
             + VV  L+  + G+N     ++I   L  AF++ SSA+ +P  +  ++    V P++ 
Sbjct: 238 FFVLVVLNLVARLCGINLFALMRHIKDELILAFSTASSASVMP-QLMKKLETYGVSPSLV 296

Query: 345 NLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIAGVGG 404
           +     G +   +G A ++  +  + VA   GI+ L +     L+  + ++S G AGV G
Sbjct: 297 SFVVPVGYSFNLDG-ASLFLGIGTLFVAQLYGID-LSLGDQALLVVTMVLTSKGAAGVPG 354

Query: 405 GATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSR 455
                    L + GLP+   A +  +  L++M  TALNV G+  A  V ++
Sbjct: 355 FMFVILSATLASAGLPLEGIAFIAGVYRLMEMPTTALNVLGNALAPLVIAK 405