Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Na+/H+-dicarboxylate symporters from Sphingobium sp. HT1-2

 Score =  119 bits (298), Expect = 2e-31
 Identities = 94/415 (22%), Positives = 190/415 (45%), Gaps = 21/415 (5%)

Query: 43  LSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSM 102
           L+  +L G+VLG   G    + +G      ++   +  ++ + ++ L+KM+I PLV  ++
Sbjct: 5   LTAYILTGMVLGVIVGFVANLWVGGDEALAKDVAGYFHLLADIFLHLIKMIIAPLVFSTL 64

Query: 103 ISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIA 162
           ++ +  +  + +LG+I    +   ++ + IS  +G++    F         GA      +
Sbjct: 65  VAGIAHMGDSAALGRIGGRALAWFIIASLISLTLGLIFVNFF-------EPGAGLNLVRS 117

Query: 163 ALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQ 222
             ++  +T A L     +L   PT+    +       I+ +V+F +  G+A   +     
Sbjct: 118 GADAGVNTEA-LNFRDFILHVFPTSMIGAMA---DNQILQIVVFSLFVGVALTAI----G 169

Query: 223 ELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVAS-Y 281
           E   PI T +EA   +++++   +M + P  +   +A  V T     +L   G +V   Y
Sbjct: 170 EKGKPIITVIEALVELMLQVTGYVMRVAPLAVFGALASSV-TVQGLGVLKTYGALVGEFY 228

Query: 282 VA-IALMFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVP 340
           +A I L  ++ G     +G    +  + +   +  AF++ SS A  P  +E Q+ +  VP
Sbjct: 229 IALICLWVLLFGAGAIFLGKRMFKLIRYVREPILIAFSTASSEAAYPKMLE-QLDRFGVP 287

Query: 341 PAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIA 400
             I +     G +   +G + +Y     + +A   GI+ L I   ++++ ++ ++S GIA
Sbjct: 288 RRIYSFVLPLGYSFNLDG-SMMYATFATIFIAQAYGID-LPIATQITILLVLMVTSKGIA 345

Query: 401 GVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSR 455
            V   +       L    LPV   A +++++  +DM RTA NV G+  A +V ++
Sbjct: 346 AVPRASLVVVAATLGQFDLPVEGVAFILAVDHFMDMGRTATNVLGNAIATSVITK 400



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 36/254 (14%)

Query: 26  FAGLLLYLFGLQKKAATLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQ--ETLSWVAIVG 83
           F   +L++F      A    Q+L  +V     G+AL  +  +G P I   E L  + +  
Sbjct: 130 FRDFILHVFPTSMIGAMADNQILQIVVFSLFVGVALTAIGEKGKPIITVIEALVELMLQV 189

Query: 84  NGYVGLLKMVIMPLVLVSMISAVVRLDKNGSLGKISSLT----IGIL----LVTTAISAL 135
            GYV    M + PL +   +++ V +   G L    +L     I ++    L+  A +  
Sbjct: 190 TGYV----MRVAPLAVFGALASSVTVQGLGVLKTYGALVGEFYIALICLWVLLFGAGAIF 245

Query: 136 IGILITQAFGLTAEGLVEGARETARIAALESRASTVADLTIPQILLSFI-PTNPFADLTG 194
           +G  + +      E ++      +  AA       +    +P+ + SF+ P     +L G
Sbjct: 246 LGKRMFKLIRYVREPILIAFSTASSEAAYPKMLEQLDRFGVPRRIYSFVLPLGYSFNLDG 305

Query: 195 ARSTSIIAVVIFGVLTGIAARKVIADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGI 254
           +   +  A +             IA    ++ PI T +          + +++ +T  GI
Sbjct: 306 SMMYATFATIF------------IAQAYGIDLPIATQI---------TILLVLMVTSKGI 344

Query: 255 AALMAKVVATSSAT 268
           AA+    +   +AT
Sbjct: 345 AAVPRASLVVVAAT 358