Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) from Escherichia coli BW25113

 Score =  125 bits (313), Expect = 4e-33
 Identities = 104/409 (25%), Positives = 199/409 (48%), Gaps = 21/409 (5%)

Query: 59  LALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISAVVRLDKNGSLGKI 118
           +A+ ++LG  +P I E +     +G+G+V L+KM+I P++  ++++ +  ++   ++G+ 
Sbjct: 17  IAIGILLGHFYPEIGEQMK---PLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRT 73

Query: 119 SSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAALESRASTV-ADLTIP 177
            ++ +    + + I+ +IG++I          +  GA      A L+++A  V AD    
Sbjct: 74  GAVALLYFEIVSTIALIIGLIIVNV-------VQPGAGMNVDPATLDAKAVAVYADQAKD 126

Query: 178 QILLSFIPTNPFADLTGA-RSTSIIAVVIFGVLTGIAARKVIADKQELETPIRTFVEAAQ 236
           Q +++FI     A + GA  S +I+ V++F VL G A  + +  K +L   I   +E+  
Sbjct: 127 QGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHR-LGSKGQL---IFNVIESFS 182

Query: 237 AIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVAIALMFV-VHGLLV 295
            ++  ++ MIM L P G    MA  +       ++ L   I+  Y+   L  V V G + 
Sbjct: 183 QVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIA 242

Query: 296 AMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVPPAIANLSASFGATIG 355
              G +  ++ + I   L     + SS + +P  ++ ++ KL    ++  L    G +  
Sbjct: 243 KATGFSIFKFIRYIREELLIVLGTSSSESALPRMLD-KMEKLGCRKSVVGLVIPTGYSFN 301

Query: 356 QNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIAGVGGGATFAALIVLP 415
            +G   IY  M AV +A     + +DI   ++L+ ++ +SS G AGV G         L 
Sbjct: 302 LDG-TSIYLTMAAVFIAQATN-SQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLS 359

Query: 416 AMG-LPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKETNEE 463
           A+G LPV   AL++ I+  +  AR   N+ G+  A  V ++ +KE + +
Sbjct: 360 AVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHK 408