Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Exodeoxyribonuclease I (EC 3.1.11.1) from Variovorax sp. SCN45

 Score =  390 bits (1003), Expect = e-113
 Identities = 214/477 (44%), Positives = 295/477 (61%), Gaps = 15/477 (3%)

Query: 8   TFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPEAALITGI 67
           TF + DYET+G  P +DRPSQFA +RTD + N +GEPL+IYC+   DYLP+PEA LITGI
Sbjct: 4   TFLWHDYETFGAVPRRDRPSQFAAIRTDAELNEVGEPLMIYCKPAPDYLPSPEACLITGI 63

Query: 68  TPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFIDPYAWSWQ 127
           TPQ    +G+ E EF A I    S P TI +GYN+IRFDDEVTR+  +RN IDPYA  WQ
Sbjct: 64  TPQVCLERGIPEHEFAAHIEQAFSQPGTIGVGYNTIRFDDEVTRFLFWRNLIDPYAREWQ 123

Query: 128 HGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHDAMADVIA 187
           +   RWDLLDV+R  +ALRP+GI+WP+ +DG  SFKLE L+ ANG+ H +AHDA++DV A
Sbjct: 124 NDCGRWDLLDVVRLTYALRPDGIQWPKKEDGKPSFKLEDLARANGLLHESAHDALSDVRA 183

Query: 188 TIELAKKVKAAQPKLFDYFFTMRHK-RKLTEL-IDIVNQT--PLMHVSGMLGRERHYTSW 243
           TI LA+ ++  QPKLFD+ F +  K R   EL +  + +T  P +HVSGM   ER   + 
Sbjct: 184 TIALARLIRDKQPKLFDFAFGLHKKDRVAVELGLPAMRETAKPFLHVSGMFPVERGCLAV 243

Query: 244 IVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLVHLN 303
           + P+A HPTN+N ++  DL  DP  L ++DA+TL+ RL+TR  DL      +PVK +HLN
Sbjct: 244 MWPLASHPTNKNELLAWDLAHDPSELRDIDADTLRLRLFTRTADLPEGVTRIPVKGIHLN 303

Query: 304 KCP-ILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQESDV 362
           K P ++   +TL    A++ G+D +  + H  + R  P++      V+++ +E  +  DV
Sbjct: 304 KSPMVVGNLRTLAPAMAERWGVDLDTAMRHAAIARDLPDMSAIWSKVYARPKE--ETPDV 361

Query: 363 DSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLTDTE 422
           D  LY GF   ADR  +  +R  +PE L        D R++ +LFRYRAR++P  L++ E
Sbjct: 362 DEDLYGGFVGNADRRRLNQLRGLSPEELAKDRTGFDDGRLDEILFRYRARNWPELLSEEE 421

Query: 423 QRRW-AAHCRDYFERNLEGYMLNLENLVHE-----HQADPKKMAILKSVYHYVEKLA 473
             RW A      F+   EG    +E L  E       AD +   IL ++Y Y E +A
Sbjct: 422 NERWEALRVARLFKG--EGGARTIEALFSEVDALSENADERGEEILGALYEYAEAIA 476