Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., exodeoxyribonuclease I from Pseudomonas sp. SVBP6

 Score =  430 bits (1105), Expect = e-125
 Identities = 218/471 (46%), Positives = 307/471 (65%), Gaps = 10/471 (2%)

Query: 8   TFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPEAALITGI 67
           + F+ DYET G+NP  DRP Q AGVRTD++ N I  P+  YCQ  +D LP P+A L+TGI
Sbjct: 4   SIFWHDYETTGINPRNDRPLQVAGVRTDLELNEIEAPINFYCQPSDDILPHPKACLVTGI 63

Query: 68  TPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFIDPYAWSWQ 127
           TPQ+  SQGL+E EF+ R+HAEL+ P T   GYNS+RFDDEVTRY+ YRNF DPYA  WQ
Sbjct: 64  TPQQLASQGLSEAEFMTRVHAELARPGTCGAGYNSLRFDDEVTRYSLYRNFFDPYAREWQ 123

Query: 128 HGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHDAMADVIA 187
            GNSRWDL+D++RA +ALRP+GIEWP+   G TS +LE L+ ANGI+H  AH+A++DV A
Sbjct: 124 GGNSRWDLIDIVRAAYALRPDGIEWPQ-QGGRTSLRLELLTAANGIDHGQAHEALSDVRA 182

Query: 188 TIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHYTSWIVPI 247
           TI LA+ ++  QPKL+D+ F +R K+K+ + I ++   PL+H+SG     R+Y   ++P+
Sbjct: 183 TIALARLIRQKQPKLYDWLFQLRSKQKVLDQIRLLQ--PLVHISGRFSAARNYLGVVLPL 240

Query: 248 AWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLVHLNKCPI 307
           AWHP N+NA+IV DL  D QPL++ DA++L+ RLYTR E++   +LPVP+KL+H+N+CP+
Sbjct: 241 AWHPRNRNALIVCDLHLDAQPLIDEDADSLRQRLYTRREEMPDGQLPVPLKLIHINRCPV 300

Query: 308 LAPAKTLTAENAQKIGIDREQCLAH-LNVIRQHPEIREKLVTVFSQEREFNQESDVDSQL 366
           +AP   L  E+ Q++ +D     A   ++I    + ++KL  ++S E EF    D + QL
Sbjct: 301 VAPLSVLRGEDQQRLELDMSVYQARAASLIATAGQWQDKLPVIYSAE-EFAPSEDPEQQL 359

Query: 367 YAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLTDTEQRRW 426
           Y GF    DR   E +R+  P+ LG       D+R+  LLFRYRAR++  TL   E++RW
Sbjct: 360 YDGFLGDRDRRLCEQVRSVDPQQLGQGQWMFDDERLPELLFRYRARNFNETLNAEERQRW 419

Query: 427 AAHCRDYFERNLEGYMLNLENLVHEHQ-----ADPKKMAILKSVYHYVEKL 472
              C+      L G    L +     Q     AD ++ A+L     +V+ L
Sbjct: 420 QTFCQQRLSDPLMGAPNTLGDFERALQDCWAEADAQQQALLGQWRSHVQAL 470