Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Exodeoxyribonuclease I from Pseudomonas sp. S08-1

 Score =  451 bits (1161), Expect = e-131
 Identities = 225/472 (47%), Positives = 312/472 (66%), Gaps = 9/472 (1%)

Query: 8   TFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPEAALITGI 67
           + F++DYET G+NP  DRP Q AG+RTD   N IGEPL IYC+  +D LP P A  ITGI
Sbjct: 17  SIFWYDYETTGINPRCDRPLQVAGIRTDEQLNEIGEPLNIYCRPSDDILPHPAACRITGI 76

Query: 68  TPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFIDPYAWSWQ 127
           TPQ    +GL E +F+A +HAEL+ P T   GYNS+RFDDEVTRY+ YRNF DPYA  WQ
Sbjct: 77  TPQILAERGLVEAQFMALVHAELALPGTCGAGYNSLRFDDEVTRYSLYRNFYDPYAREWQ 136

Query: 128 HGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHDAMADVIA 187
            GNSRWDL+D++RA +ALRPEGIEWP++++G  S KLE L+VANGI+H  AHDA++DV A
Sbjct: 137 GGNSRWDLIDLVRAAYALRPEGIEWPQDEEGRVSLKLERLTVANGIDHGQAHDALSDVRA 196

Query: 188 TIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHYTSWIVPI 247
           TI LA+ ++  QP L+D+ + +R K K+ E I ++   PL+HVSG     RHY + ++P+
Sbjct: 197 TIGLARLIRDRQPLLYDFLYQLRSKAKVVEQIRLLQ--PLVHVSGRFAGSRHYLAVVLPL 254

Query: 248 AWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLVHLNKCPI 307
           AWHP N+NA+IV DL  DPQPL +LDA+ L+ RLYTR ++LA  ELPVP+KL+H+NKCP+
Sbjct: 255 AWHPRNRNALIVCDLQSDPQPLFDLDADGLRRRLYTRRDELAEGELPVPLKLLHINKCPV 314

Query: 308 LAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEI-REKLVTVFSQEREFNQESDVDSQL 366
           +AP K L  ++ +++ ID  QC    + + +H  + + KL  +++ + +F    D + QL
Sbjct: 315 VAPLKVLRPDDIERLQIDMAQCEQRASALGEHQALWQSKLADLYAAD-DFEPLHDPEHQL 373

Query: 367 YAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLTDTEQRRW 426
           YAGF    DR   E +R ++ E L       +D+R+  LLFRYRAR++P +LT  E++RW
Sbjct: 374 YAGFLGDRDRRLCEQVRHSSAEQLARDNWAFSDERLPELLFRYRARNFPDSLTSAERQRW 433

Query: 427 AAHCRDYFERNLEGYMLNLENLVHEHQAD-----PKKMAILKSVYHYVEKLA 473
              CRD    +  G    L N     Q +     P +  +L++   Y   L+
Sbjct: 434 QEFCRDRLSNSEMGAPNTLANFELALQTEWPLSSPVQQQVLQAWQEYARLLS 485