Pairwise Alignments

Query, 224 a.a., LrgB family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 6e-32
 Identities = 70/210 (33%), Positives = 115/210 (54%)

Query: 5   ITLGVFFVARWVAQKCTTPLANPLLISIGILIPLLTYLKVPFETYYADNQWLSYLLQPAV 64
           ITLG + +     +K       P+L+S+ ++I +L    + +  Y    + +  LL PA 
Sbjct: 22  ITLGAYQLVLAGFEKTRWIFLQPVLVSMLLVIGVLISCGLSYAEYRKSTEIMGILLGPAT 81

Query: 65  VALAYPLYEQLPQIRANWRIIALACGVGSVMSMITASLIAVSMGADIELIAALMGKSVTT 124
           VALA PLY  L +IR  +  I     +G V++     L+    GA+  ++  +  KSVT+
Sbjct: 82  VALAVPLYLNLRRIRQLFWPIFTTLVIGGVLATGLCVLLGWWFGAEHRMLMTMAPKSVTS 141

Query: 125 PIAMEVARQLGGEPAIAAILVLLVGLFGAILAYPIYKLLNITHPIAKGLTMGTVSHALGT 184
           PIAM VA Q+GG  A+AA+ VL+ G+ GA++       L +  P A+G+ +G  +HA+GT
Sbjct: 142 PIAMLVAEQIGGVAALAAVFVLITGVIGAMIGPAYLSRLGVHSPEARGMALGMTAHAVGT 201

Query: 185 ATCAEKDPRDAAFSSLALVVCGVITSVLAP 214
           +   ++     AF++LA+ + GV T+V  P
Sbjct: 202 SVALQESEECGAFAALAMSLMGVATAVFLP 231