Pairwise Alignments

Query, 224 a.a., LrgB family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  127 bits (320), Expect = 1e-34
 Identities = 65/217 (29%), Positives = 114/217 (52%)

Query: 2   WLIITLGVFFVARWVAQKCTTPLANPLLISIGILIPLLTYLKVPFETYYADNQWLSYLLQ 61
           WL +TL  +  +RW+ ++    L +PL++   +L+ +   +   +  Y AD  WL  +L 
Sbjct: 10  WLALTLSAYIFSRWIYRRTGRYLLSPLILVPVLLLAVAVPMNTAYAEYSADTHWLMLVLG 69

Query: 62  PAVVALAYPLYEQLPQIRANWRIIALACGVGSVMSMITASLIAVSMGADIELIAALMGKS 121
           P  VA A P+++Q   +   W  + L    GS  S+ T+  +A ++  D  +  +L+ +S
Sbjct: 70  PVTVAFAVPIWQQRKLLARYWSALLLGMIAGSAASIATSFGLAKALALDPSVALSLVPRS 129

Query: 122 VTTPIAMEVARQLGGEPAIAAILVLLVGLFGAILAYPIYKLLNITHPIAKGLTMGTVSHA 181
           +TTP AM V+  LGG P + A+ V+  G+FGA+L   + K L +  P+A+G   G  +H 
Sbjct: 130 ITTPFAMPVSSDLGGVPELTAVFVMFTGVFGAMLGGVLLKWLPLRTPLARGALFGVGAHG 189

Query: 182 LGTATCAEKDPRDAAFSSLALVVCGVITSVLAPSLFA 218
            G +   E    + + + L +V+ G++    AP L A
Sbjct: 190 AGVSRAHEVGGEEGSVAGLVMVLTGLLNLFAAPLLAA 226