Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 156 a.a., Cytidine deaminase (EC 3.5.4.5) from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 1e-13
 Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 13/137 (9%)

Query: 60  AAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGV 119
           A A +YAP S F VGA V    GR++ G N+E   A   + V AE CA+    + G   V
Sbjct: 23  AQARAYAPYSRFAVGAAVLDAQGRIHAGCNVE--NAAYPEGVCAEACALGAMVLAGGLRV 80

Query: 120 ADITI------NFSPCGHCRQFMNELTTASSLKIQLPK---RAAKTLQEYLPESFGPADL 170
             + I        +PCG CRQ + E  +     +   +   R   TL E LP SFGP  L
Sbjct: 81  EAVAIAGDGDTPVTPCGGCRQKLREFGSPDLPVLVADRHRWRGHFTLGELLPSSFGPDHL 140

Query: 171 GIDSGLMSPVNHGKTSD 187
            + +   +  + G T D
Sbjct: 141 TVAAA--AEPSRGNTHD 155



 Score = 32.7 bits (73), Expect = 5e-06
 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)

Query: 190 EELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQAM 249
           E L+  A  A   +++PY++   G A+    G I+ G   ENAA+   +     AL   +
Sbjct: 14  ERLLLAAREAQARAYAPYSRFAVGAAVLDAQGRIHAGCNVENAAYPEGVCAEACALGAMV 73

Query: 250 MMGESFEDIEAAALVESATGKISHLADTQATL-EVINPDIPL 290
           + G     +EA A+       ++     +  L E  +PD+P+
Sbjct: 74  LAGGL--RVEAVAIAGDGDTPVTPCGGCRQKLREFGSPDLPV 113