Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., Cytidine deaminase (EC 3.5.4.5) from Sphingobium sp. HT1-2

 Score = 58.5 bits (140), Expect = 9e-14
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 27/150 (18%)

Query: 48  EDADLR--VALLPIAAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQ 105
           ED D+   VA    A A+++AP S F VGA VR   G +  G+N  F  A  G ++ AE 
Sbjct: 4   EDKDIAALVAAARGALAHAHAPYSRFAVGAAVRLTDGSIVTGSN--FENASYGLSLCAET 61

Query: 106 CAISHAWMKGE-KGVADITI---------------NFSPCGHCRQFMNELTTASSLKIQL 149
            A++    +G    VA+I +                 SPCG CRQ +NE    +   + +
Sbjct: 62  VALATVNAQGRLADVAEIAVVGGGMAADGSVGGEAIVSPCGRCRQVINEAEQMAGRTLAI 121

Query: 150 PKRAAK-------TLQEYLPESFGPADLGI 172
              A +        + + LP +FGPADLGI
Sbjct: 122 YCVAPEGDGLVEHRIADLLPHAFGPADLGI 151



 Score = 38.9 bits (89), Expect = 7e-08
 Identities = 24/76 (31%), Positives = 39/76 (51%)

Query: 188 DDEELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQ 247
           D   L+  A  A+  +H+PY++   G A+++  G+I  G+  ENA++  SL    VALA 
Sbjct: 7   DIAALVAAARGALAHAHAPYSRFAVGAAVRLTDGSIVTGSNFENASYGLSLCAETVALAT 66

Query: 248 AMMMGESFEDIEAAAL 263
               G   +  E A +
Sbjct: 67  VNAQGRLADVAEIAVV 82



 Score = 22.3 bits (46), Expect = 0.007
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 254 SFEDIEAAALVESATGKISH 273
           S ED + AALV +A G ++H
Sbjct: 2   SAEDKDIAALVAAARGALAH 21