Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., cytidine deaminase from Agrobacterium fabrum C58

 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 11/115 (9%)

Query: 60  AAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGV 119
           A A++YAP S+F VGA +R   G++Y GAN+E       Q   AE  AIS   M G K +
Sbjct: 17  AMAFAYAPYSKFPVGAAIRAEDGKIYTGANIE--NISFPQGWCAEPSAISAMIMGGAKKI 74

Query: 120 ADITI------NFSPCGHCRQFMNELTTASS---LKIQLPKRAAKTLQEYLPESF 165
           +++ +        SPCG CRQ + E  T  +   L  +   +   T++E LP  F
Sbjct: 75  SEVAVIAEKLPLCSPCGGCRQKIAEFATPETKIYLCDETGVQKVMTMEELLPSVF 129



 Score = 39.7 bits (91), Expect = 4e-08
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 192 LIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQAMMM 251
           L + A+ AM  +++PY++   G A++   G IY GA  EN +F P     + +   AM+M
Sbjct: 10  LFEAAVEAMAFAYAPYSKFPVGAAIRAEDGKIYTGANIENISF-PQGWCAEPSAISAMIM 68

Query: 252 GESFEDIEAAALVE 265
           G + +  E A + E
Sbjct: 69  GGAKKISEVAVIAE 82