Pairwise Alignments

Query, 98 a.a., integration host factor subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 90 a.a., DNA-binding protein HU-beta from Vibrio cholerae E7946 ATCC 55056

 Score = 72.0 bits (175), Expect = 1e-18
 Identities = 35/86 (40%), Positives = 51/86 (59%)

Query: 3  LTKAELAEALFEQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNERPG 62
          + K +L E +     +SK  A   ++ F E +   L+SG+QV L GFG F +R +  R G
Sbjct: 1  MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG 60

Query: 63 RNPKTGEDIPITARRVVTFRPGQKLK 88
          RNPKTGE+I I   +V +F+ G+ LK
Sbjct: 61 RNPKTGEEIKIAEAKVPSFKAGKALK 86