Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Regulator of RpoS from Xanthobacter sp. DMC5

 Score =  121 bits (304), Expect = 2e-32
 Identities = 74/193 (38%), Positives = 108/193 (55%), Gaps = 7/193 (3%)

Query: 176 ELVKLNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQ 235
           EL K N+ LE ++ ER +    V +Q+  ++  D+LTGL NR   +  L      AQ + 
Sbjct: 140 ELEKRNRQLEIEIEERRR----VEKQIRHMATHDALTGLGNRILFVEHLTRARAQAQRHG 195

Query: 236 QPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPE 295
           + F  + IDIDGFK VND HGH VGDK+L  IAN LR + R +D   RL GDEF VI  +
Sbjct: 196 REFALLYIDIDGFKQVNDRHGHGVGDKLLCAIANRLRGNLRQEDFAVRLSGDEFAVIMVD 255

Query: 296 TNTAGGVYI-AEQVCRAIQQQVISLENNIRWQGSV--SMGVAAFASNMKDHHELLRAADQ 352
                  +   +++C  +++  I   N+  +  SV  S+G+A +  +  D +EL+R AD 
Sbjct: 256 LTDGDAAHAQGQRLCEMLREPYIVSYNDQAYTVSVGASIGIALYPRHSTDENELIRLADT 315

Query: 353 AVYLAKNSGKNRV 365
           A+Y  K  GK+ V
Sbjct: 316 AMYEVKQQGKDGV 328