Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Sphingobium sp. HT1-2

 Score =  112 bits (279), Expect = 4e-29
 Identities = 69/173 (39%), Positives = 94/173 (54%), Gaps = 3/173 (1%)

Query: 197 QVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHG 256
           Q  R L  L+MTD+LTGL NR   M  L+      + +      V+ID+D FK +ND  G
Sbjct: 317 QAERHLAHLAMTDALTGLANRSHFMASLMQAAQSTERSGGQMAVVLIDVDEFKRINDSAG 376

Query: 257 HDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQV 316
           HD GD +L  +A  LRD  R  D++ R+GGDEF VI   T   G   +   + R I +  
Sbjct: 377 HDAGDALLCAVAERLRDSVRPADMIARMGGDEFAVIL--TRLRGLADLDTILSRMIARLH 434

Query: 317 ISLENNIR-WQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAF 368
           + L +  R     VSMGVA +  +  D  +L++ AD A+Y AKNSG+ R C F
Sbjct: 435 MPLRHGGRDIDCRVSMGVALYPDHAGDMIDLMKHADIALYEAKNSGRGRACLF 487