Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

 Score =  617 bits (1590), Expect = 0.0
 Identities = 321/612 (52%), Positives = 435/612 (71%), Gaps = 12/612 (1%)

Query: 1   MSTQFDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALV 60
           MS  FD++ FL T + +PGVYRM++ EA ++YVGKAK+LKKRL SYFRK   + KT ALV
Sbjct: 1   MSQVFDASAFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV 60

Query: 61  SNIAKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRG 120
           + IA+++ T+T  ETEAL+LE N IK++ P YN+LLRDDKSYPY+FLS  + PRL  HRG
Sbjct: 61  ARIAQVETTITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRG 120

Query: 121 AKKRRGEYFGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVK 180
           AKK +G YFGPYP +GA+RE+L L+QK F VRQCED+ Y+NRTRPCL YQI RC GPC  
Sbjct: 121 AKKAKGRYFGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCT- 179

Query: 181 GLISDQGYQEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQ 240
            L++ + Y E V +  +FL+G+  Q+ + L  +ME+A+  L FE AA+ RDQI  +RRVQ
Sbjct: 180 DLVTAEEYAEDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQ 239

Query: 241 EQQFVSDDSLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESF 300
           +QQ++   S  D+DV+      G AC+H++ +R G+VLGS++ FP++  +    EV  +F
Sbjct: 240 DQQYIEGGS-GDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAF 298

Query: 301 LSQYYLSHSEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLA 360
           LSQYYL ++E R +P  +I+N  + E+  A+  A+  L GR++T      GTR R+ +LA
Sbjct: 299 LSQYYLGNAE-RELPGELIVN-VVHEDFNAITEALHTLRGRELTISHRVRGTRARWQQLA 356

Query: 361 NTNALTAITTKMNHKMTISQRFKALQEELGMDAI-TRMECFDISHTMGESTMASCVVFNQ 419
            TNA  A+  ++ ++  ++ RF+AL E LG+D +  R+EC+DISH+ GE+T+ASCVVF  
Sbjct: 357 VTNAEQALNARLANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGP 416

Query: 420 EGPLKQEYRRYNITGITGGDDYAAMAQVLERRYSKQLD-SSKIPDIIFIDGGKGQLNRAY 478
           EGP+K +YRR+NI  +T GDDYAAM Q L RRY +  D   K+PD++ +DGGKGQLN A 
Sbjct: 417 EGPIKSDYRRFNIEDVTAGDDYAAMHQALTRRYGRIKDGEGKLPDVLLVDGGKGQLNMAR 476

Query: 479 EIISSC-WQDWPKYPKIIGIAKGVTRKPGLETLITID-GDEFHLPSDAPALHLIQHIRDE 536
           +++    + D      ++G+AKGVTRK G ETL   D   EF L  D+ ALHLIQ IRDE
Sbjct: 477 DVMQELGFTDL----TLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHLIQQIRDE 532

Query: 537 SHNHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGI 596
           +H  AI GHRA+RGK RR S+LE + GVGPKRR+ LLK+ GG+QEL RAS++EIAK PGI
Sbjct: 533 AHRFAITGHRARRGKARRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDEIAKAPGI 592

Query: 597 SHALAENIYQAL 608
           S  LAE+IY +L
Sbjct: 593 SKKLAESIYASL 604