Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 65.1 bits (157), Expect = 6e-15
 Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 11/180 (6%)

Query: 4   QFDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNI 63
           Q D+ P +      PGVY  +N E EVIYVGK+ ++KKR+  +F  +  S K+    +NI
Sbjct: 200 QVDALPMV------PGVYYFHNEEGEVIYVGKSINIKKRIIQHFNIDYKSRKSLDFKNNI 253

Query: 64  AKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDD--KSYPYIFLSAHKHPRLSSHRGA 121
             I   +   E  AL+ E   IK+  P+YN   R     +  +++   + + RL S+   
Sbjct: 254 TDITYELMGNELVALLFESAEIKRMKPQYNRQQRRSVFNTGIFVYEDNNGYKRL-SYDTI 312

Query: 122 KKRRGEYFGP-YPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTR-PCLMYQIGRCAGPCV 179
            K   E   P    S   +    L  K+     C+      +T   C  YQ+ +C G C+
Sbjct: 313 NKADNESLTPIIALSNHFKAKGFLFHKVAKYNLCQKLCDLYKTNGACFDYQVHQCNGACI 372