Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Excinuclease cho (excinuclease ABC alternative C subunit) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 9   PFLKTVTNQPGVYRMYNAEAEVI--YVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKI 66
           PFL      PGVY ++++E++ +  Y+GK+ +++ R+ S+ R    +     ++    +I
Sbjct: 35  PFLSEAPALPGVY-IFHSESDTLPLYIGKSVNIRSRVLSHLR----TPDEATMLRQARRI 89

Query: 67  DVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRGAKKRRG 126
               T  E  AL+LE   IK+  P +N  LR ++    + LS  K   +S+         
Sbjct: 90  SWICTAGEMGALLLEARLIKEQQPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEP 149

Query: 127 EYFGPYPDSGAVRETLHLI---QKI-FPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGL 182
             FG + +  A  ++L  +   QK+ + +   E     +R R C  + + RCAG C  G 
Sbjct: 150 NLFGLFANRRAALQSLQNLADEQKLCYGLLGLEPV---SRGRACFRFALKRCAGACC-GQ 205

Query: 183 ISDQGYQEIVHYLRL 197
            + Q      H+LRL
Sbjct: 206 ETPQ-----AHFLRL 215