Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Excinuclease ABC subunit C from Kangiella aquimarina DSM 16071

 Score =  552 bits (1423), Expect = e-161
 Identities = 295/601 (49%), Positives = 403/601 (67%), Gaps = 12/601 (1%)

Query: 11  LKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKIDVTV 70
           L  ++ +PGVY+M   + E +YVGKAK+L  R+ SYF K   S KT+ LV+ I  I  TV
Sbjct: 19  LAHLSKKPGVYQMLGKDGETLYVGKAKNLSNRVKSYFVKQHQSPKTELLVTYIEDIHTTV 78

Query: 71  THTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRGAKKRRGEYFG 130
           T TETEAL+LE+N IK+Y P++NVL RDDKSYP++FLSA   PRL+ HRGAKK +G+YFG
Sbjct: 79  TETETEALLLENNLIKKYKPRFNVLFRDDKSYPFVFLSAGDFPRLAYHRGAKKEKGDYFG 138

Query: 131 PYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGYQE 190
           P+P + AVR++L LIQK F +RQCED+ ++NR+RPCL YQI RC  PCV G IS + Y +
Sbjct: 139 PFPSTSAVRQSLSLIQKTFQIRQCEDSYFANRSRPCLQYQIKRCTAPCV-GYISKEEYAK 197

Query: 191 IVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDDSL 250
            V  ++LF QGK  QV+  L +KM+ AS+ L FE AA+ RDQI+ +R V +Q  +S ++ 
Sbjct: 198 DVENVKLFYQGKSEQVIKRLQKKMDVASQNLEFEIAARYRDQIKQMRHVMQQSVISGNA- 256

Query: 251 EDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSHSE 310
            D+DV+G A  +G+ CI ++ IRQG ++G++++FPK+P  +   E+  +FL  YYLS +E
Sbjct: 257 SDMDVIGVAYASGVCCILLVFIRQGMIVGNKTYFPKVPKHSDLQEIVSTFLGFYYLSGAE 316

Query: 311 ARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAITT 370
              IP ++++   L E+ EALQ A S+  G KVT      G    +   AN NA  ++  
Sbjct: 317 ---IPKQVVI-ENLPEDLEALQEAFSQQRGSKVTLRQASRGQVKEWQTFANKNAEHSLRA 372

Query: 371 KMNHKMTISQRFKALQEELGMDAITR-MECFDISHTMGESTMASCVVFNQEGPLKQEYRR 429
           K+N K   +QR   LQ+ L M+ + + +ECFDISHT G+ T+ASCVVF++ GP K +YR 
Sbjct: 373 KLNSKSNFTQRLLDLQKSLQMEQMPKHVECFDISHTQGKQTVASCVVFDENGPKKADYRI 432

Query: 430 YNITGITGGDDYAAMAQVLERRYSKQLDSSK-IPDIIFIDGGKGQLNRAYEIISSCWQDW 488
           +NI+GITGGDDYAAM Q L RRY +  D  + +PD++ +DGGKGQL +A E+ +      
Sbjct: 433 FNISGITGGDDYAAMQQALTRRYKRLRDEQQPLPDLVIVDGGKGQLAKAEEVFNELEL-- 490

Query: 489 PKYPKIIGIAKGVTRKPGLETL-ITIDGDEFHLPSDAPALHLIQHIRDESHNHAIAGHRA 547
            K   +IG++KG  RK G+E +          L  D+ ALH IQHIRDE+H  AI  HR 
Sbjct: 491 -KSIYLIGVSKGSDRKVGMEQIWFPGQHQPLLLEDDSKALHFIQHIRDEAHRFAITKHRH 549

Query: 548 QRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISHALAENIYQA 607
           QR K+   S LE I GVG KRRQALL++ GG QE++ ASV+EIA  PGIS +LA+ IY  
Sbjct: 550 QRKKSATKSMLEEIPGVGAKRRQALLRHFGGWQEVEGASVKEIAGAPGISLSLAQKIYDY 609

Query: 608 L 608
           L
Sbjct: 610 L 610