Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., excinuclease ABC, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  309 bits (791), Expect = 3e-88
 Identities = 195/594 (32%), Positives = 320/594 (53%), Gaps = 43/594 (7%)

Query: 18  PGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSE-KTKALVSNIAKIDVTVTHTETE 76
           PGVY+ YN E ++IYVGKAK LKKR+ SYF K+     KT+ +V  I +I+ T+ ++E +
Sbjct: 18  PGVYKYYNEEDKLIYVGKAKSLKKRVASYFVKSTGLNLKTRRMVKEIRRIEFTIVNSEFD 77

Query: 77  ALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRGAKKRRGEYFGPYPDSG 136
           AL+LE+N IK+  P+YN+LL+DDK+YPY+ L+    P+L   R     RG YFGP+    
Sbjct: 78  ALLLENNLIKKNQPRYNILLKDDKTYPYLLLTKEHFPQLYPTRKLIPSRGTYFGPFASVK 137

Query: 137 AVRETLHLIQKIFPVRQCE-----DTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGYQEI 191
           A+   L LI+ +F +R C+       +   + + CL Y IG C GPC +GL  +  Y + 
Sbjct: 138 AMNNILELIRSLFTIRTCKLDLNPYKIAEQKYKVCLEYHIGNCLGPC-EGLQGEPDYLKD 196

Query: 192 VHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDDSLE 251
           +   +  L+G      +    KM++A+ +L FE A + +D++  + + Q +  V++  + 
Sbjct: 197 IDQAKHILKGNLGIPKAYFKSKMQEAAEDLAFEKAQRFKDKLDLLEKYQAKSLVTNPHVT 256

Query: 252 DLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSHSEA 311
           DLDV      +  A ++ L I+ G +  +++   K   D ++ E+    L+  +    + 
Sbjct: 257 DLDVFAIVSADKFAFVNYLNIKNGAINITKTVELKKKLDETEQEL---LLTAIFRLKDQF 313

Query: 312 RSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNAL------ 365
           +S    I+ N  L +  E L + + ++            G + + ++LA  NA+      
Sbjct: 314 QSDAKEILSNIDLDDPIEGLHLTVPKI------------GDKRKLVELALKNAMYYKKEK 361

Query: 366 TAITTKMNHKMTISQRFKALQEELGM-DAITRMECFDISHTMGESTMASCVVFNQEGPLK 424
             ++ K   K   ++    LQ++L + +A   +ECFD S+  G   +AS V F    P K
Sbjct: 362 ALLSGKAKEKK--NRVILQLQKDLSLKEAPDHIECFDNSNIQGAYPVASMVCFMDGKPAK 419

Query: 425 QEYRRYNITGITGGDDYAAMAQVLERRYSKQLDSSK-IPDIIFIDGGKGQLNRAYEIISS 483
           +EYR +++  + G DD+A+M +++ RRY + L  +K +P +I IDGGKGQL+ A E + S
Sbjct: 420 KEYRHFHVKTVEGPDDFASMTEIVGRRYKRLLKENKPLPKLIVIDGGKGQLSAAVEALKS 479

Query: 484 CWQDWPKYPKIIGIAKGVTRKPGLETLITIDGDEF--HLPSDAPALHLIQHIRDESHNHA 541
              D      IIGIAK +         I   GD F  H+   + +L LIQ +RDE+H  A
Sbjct: 480 L--DIYGQVPIIGIAKKLEE-------IYFPGDSFPLHIDKKSESLRLIQRVRDEAHRFA 530

Query: 542 IAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPG 595
           I  HR  R K    + L+ IEG+GP     LLK+   +++++ AS E++A++ G
Sbjct: 531 ITFHRDIRSKDSFKTALDTIEGIGPSTSNKLLKHYKSLKKIREASEEDLAQIIG 584