Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., UvrABC system protein C from Acinetobacter radioresistens SK82

 Score =  499 bits (1285), Expect = e-145
 Identities = 274/602 (45%), Positives = 392/602 (65%), Gaps = 17/602 (2%)

Query: 11  LKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKIDVTV 70
           L  +T  PGVYRM   + E++YVGKAK+LK R++SYF K ++  KT+ALV+ I  I   +
Sbjct: 13  LANMTTLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIYDIQTLI 72

Query: 71  THTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHK-HPRLSSHRGAKKRR-GEY 128
           T +ETEAL+LE N IK + P YN++LRDDKSY YIF+S+ K +PR++S RG  K + G++
Sbjct: 73  TRSETEALLLEQNLIKLHRPPYNIMLRDDKSYVYIFVSSDKPYPRVASGRGKGKHQVGKF 132

Query: 129 FGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGY 188
           FGPYP + + R+TL +++K+F VRQCE++ ++ R RPCL YQI RC+ PCV GL+S + Y
Sbjct: 133 FGPYPSAYSARDTLVVLEKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCV-GLVSPEDY 191

Query: 189 QEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDD 248
           QE V     FLQG   ++   L+ KME+A+ +L FE A   RD++  +R VQ QQ V   
Sbjct: 192 QEDVKNTIRFLQGDTKELNQELIAKMEEAAEKLEFEKAVFYRDRLGLLREVQAQQAVYKV 251

Query: 249 SLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSH 308
             E  D+L  A + G+ C+ I+ +R G++LG +S+FP + +D    ++   F++ +Y   
Sbjct: 252 KGE-ADILAIAYQAGVTCVQIMHVRNGRMLGGKSYFPDMQNDDLG-QMLSDFMANFYFQV 309

Query: 309 SEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAI 368
           ++   +PA +I+N  L   T+ L+ AI    G+KV        TR  + +LA  N   AI
Sbjct: 310 AD--EVPAELIVNVALPN-TQELEQAIQTEFGKKVQIKHKVRETRAEWQELAVMNVQHAI 366

Query: 369 TTKMNHKMTISQRFKALQEELGMDAITRMECFDISHTMGESTMASCVVFNQEGPLKQEYR 428
             ++++ + + +RF  L++ +G   I R+ECFDISHTMGE+ +ASCVVF+Q G  K++YR
Sbjct: 367 KGQLSNHLELHERFHQLEQVMGRP-IDRIECFDISHTMGEAPIASCVVFDQGGARKRDYR 425

Query: 429 RYNITGITGGDDYAAMAQVLERRYSKQLDSSKIPDIIFIDGGKGQLNRAYEIISSCWQDW 488
           ++ I  ITGGDDYAAM Q L RRY K L    +PD++ IDGGKGQL+ A E++    QD 
Sbjct: 426 QFAIQDITGGDDYAAMRQALTRRYKKSL----LPDLLLIDGGKGQLHMAMEVM----QDL 477

Query: 489 PKYPKIIGIAKGVTRKPGLETLITIDGDEFHLPSDAPALHLIQHIRDESHNHAIAGHRAQ 548
                ++G++KG  RKPGLETL   DG +  L  D  ALHLIQ +RDE+H  AI  HRA+
Sbjct: 478 GLDAFMVGVSKGEGRKPGLETLHFTDGRKIQLAEDHKALHLIQQVRDEAHRFAITRHRAK 537

Query: 549 RGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISHALAENIYQAL 608
           R K R  S LE I G+GPKRR+ LL + GG+Q + +AS +E+  VPG+  ALA  IY+ L
Sbjct: 538 RDKRRAGSVLEAIPGLGPKRRRDLLTHFGGIQGVLKASEKELMVVPGLGPALARTIYKIL 597

Query: 609 KQ 610
            +
Sbjct: 598 HE 599