Pairwise Alignments

Query, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

Subject, 786 a.a., DNA polymerase II from Erwinia tracheiphila SCR3

 Score =  814 bits (2103), Expect = 0.0
 Identities = 433/789 (54%), Positives = 549/789 (69%), Gaps = 16/789 (2%)

Query: 6   GFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIAAELSITP 65
           GF+LTRH RD A  T++ LWLAT +GP +L +  +  V FI Q+A  E   +  +     
Sbjct: 7   GFLLTRHWRDTASGTEVVLWLATDAGPQRLALPVQESVAFIPQTALAEAKALLKQ-EHHY 65

Query: 66  SLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFIQGS 125
            L PL L+ F  +P+AA YC   R  Q L + L +  +++ EADIR  +RFLMER+I   
Sbjct: 66  RLVPLELKDFHQRPVAALYCRQYRQLQRLEKLLRENGVMVYEADIRPPERFLMERYITSP 125

Query: 126 IEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVI 184
           + F+G+ +       +  A+ +   DY P L  VSLDIE +  G LY IGL+      V 
Sbjct: 126 VWFSGEHSG----NSLVNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRDVY 181

Query: 185 MIGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAE 239
           M+G PE  +       +++V    QLL+ L AWFEQ DPDV+IGW+VV FD R+L K A+
Sbjct: 182 MLG-PENGDASGLDFTLEYVSSRPQLLEKLNAWFEQHDPDVLIGWNVVQFDLRMLQKHAD 240

Query: 240 FHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQ 298
            + + L +GR  +   +R    +    F    GR+++DGID LK+A ++F S+SLE+VS+
Sbjct: 241 RYGIPLQLGRNHEVLEWREHGFKPGVFFAQATGRLIVDGIDALKSAFWNFDSFSLEAVSR 300

Query: 299 ELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQRSRL 358
           +LLGEGK I N  DRM EI+Q F  DKP+LARYNL+DC LV +IF  T L+ F ++R+ +
Sbjct: 301 QLLGEGKTIDNPWDRMQEIDQHFAEDKPALARYNLKDCELVTRIFQHTELIPFLLERASV 360

Query: 359 TGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSVLVL 418
           TG+  DR GGSVAAF++LYLP++HR GYVAP L      ASPGGYVMDS PGLYDSVLVL
Sbjct: 361 TGLAADRHGGSVAAFSHLYLPRMHRVGYVAPGLGQVAPEASPGGYVMDSRPGLYDSVLVL 420

Query: 419 DFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEKLWA 478
           D+KSLYPSIIR+FLIDP+GLIEG+  P  +QA  +V GFRG  F RT+H LPE++ ++W 
Sbjct: 421 DYKSLYPSIIRTFLIDPVGLIEGISHP-NEQA--SVSGFRGAYFSRTRHCLPEIVSQIWQ 477

Query: 479 ARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIE 538
            R+ AK+   +  SQA+KIIMN+FYGVLG+S CRFFD RLASSIT+RGHEIM QTK L+E
Sbjct: 478 GREAAKKQGNRPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITLRGHEIMRQTKALVE 537

Query: 539 ARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEY 598
           A GY VIYGDTDSTFV L   + +Q A++IGH LV +IN+WW  HL+Q Y L S LELEY
Sbjct: 538 AEGYDVIYGDTDSTFVWLRTPHDEQAANDIGHRLVEKINRWWQTHLRQVYNLDSALELEY 597

Query: 599 ETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQHQLYQ 658
           ETHY RFLMPTIRG+E GSKKRYAGL  +G+NE+++FKGLE+ RTDWTPLAQ+FQ  LY 
Sbjct: 598 ETHYCRFLMPTIRGAEQGSKKRYAGLIREGNNERMVFKGLETVRTDWTPLAQQFQQNLYL 657

Query: 659 LIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADDINA 718
            IF  Q  + YIR +V Q L G+LD QLVY KRLRR L +YQ+NVPP VRAAR+AD +N 
Sbjct: 658 KIFKNQPYQGYIREMVRQLLDGELDQQLVYGKRLRRPLSDYQRNVPPHVRAARLADALNQ 717

Query: 719 KLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQFDE 778
           KLGRPLQYQ  G I YV+  NGPEP E   +P+DY HY+ KQL+PVAD ILPF+   F  
Sbjct: 718 KLGRPLQYQNGGKIRYVMATNGPEPLEARTTPLDYDHYLTKQLQPVADGILPFMADDFAT 777

Query: 779 LIAPQLGLF 787
           LI  QL LF
Sbjct: 778 LITGQLWLF 786