Pairwise Alignments

Query, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., DNA polymerase II from Dickeya dianthicola ME23

 Score =  820 bits (2118), Expect = 0.0
 Identities = 428/789 (54%), Positives = 549/789 (69%), Gaps = 12/789 (1%)

Query: 5   QGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIAAELSIT 64
           QGFVLTRH +D      +E WLAT +GP ++ +  ++ V F+       + ++ +     
Sbjct: 8   QGFVLTRHWQDTPAGVLVECWLATDTGPYRVRLSPQQAVAFVPMRHQARISQLLSGEKHW 67

Query: 65  PSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFIQG 124
             L PL+L++F  +P    YC   R    L +KL +A + + EADIR  +RFLMERFI  
Sbjct: 68  -QLRPLALKNFHHEPQLGLYCPQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERFITA 126

Query: 125 SIEFTGQITDFGHYRQVQQAKCRQGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVI 184
            + F+G+ T  G    V+       DY P+L  VSLDIE S  G LY IGL+     +V 
Sbjct: 127 PVWFSGEETADGLIDNVKLKPAP--DYRPSLKTVSLDIETSRHGELYCIGLEGCGQRQVF 184

Query: 185 MIGQP-----EPAETPIQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAE 239
           M+G       +  +  +++V    QLL+ L  W    DPDVIIGW++V FD R+L + AE
Sbjct: 185 MLGPENGNADDAGDLTLEYVASRPQLLEKLNQWLHTHDPDVIIGWNLVQFDLRVLQQHAE 244

Query: 240 FHKLKLTIGRAQQPSFFRTASQTQQGFIS-IPGRVVLDGIDTLKTATYHFRSWSLESVSQ 298
            +++ L +GR  Q   +R     Q  F +  PGR+++DGI+ LK+AT++F S+SLE VS+
Sbjct: 245 RYRIPLRLGRNGQELEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVSR 304

Query: 299 ELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQRSRL 358
            LLGEGKA  N + R++EI Q F+ DKP+LARYNL+DC LV +IF  THL+ F ++R+ +
Sbjct: 305 ALLGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMSFLLERASV 364

Query: 359 TGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSVLVL 418
           TG+  DR GGSVAAFT+LYLP++HRAG+VAPNL      ASPGGYVMDS PGLYDSVLVL
Sbjct: 365 TGLAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVL 424

Query: 419 DFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEKLWA 478
           D+KSLYPSIIR+FLIDP+GLI GL+ P      HAV GFRG  F R +H LP ++E +W 
Sbjct: 425 DYKSLYPSIIRTFLIDPVGLITGLQQP---DEQHAVEGFRGAWFSRRQHCLPAIVEGIWH 481

Query: 479 ARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIE 538
            RD AK+   +  SQA+KIIMN+FYGVLGSSGCRFFD RLASSIT+RGH+IM QT+ LIE
Sbjct: 482 ERDLAKQQNNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHDIMRQTRSLIE 541

Query: 539 ARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEY 598
           A+GYQVIYGDTDSTFV L   + + +A+ IGH LV  IN WW +HL Q++ LTS LE+EY
Sbjct: 542 AKGYQVIYGDTDSTFVWLKRPHREDDANLIGHELVAYINDWWQQHLHQQHGLTSALEMEY 601

Query: 599 ETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQHQLYQ 658
           ETH+ RFLMPTIRG+E GSKKRYAG+      EQ++FKGLE+ R+DWTPLAQ+FQ QLYQ
Sbjct: 602 ETHFHRFLMPTIRGAELGSKKRYAGMTITAQGEQMVFKGLETVRSDWTPLAQQFQQQLYQ 661

Query: 659 LIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADDINA 718
            IFH +  + ++R  V +TL G+ DD LVY+KRLR +L +YQ+NVPPQVRAARMADD N 
Sbjct: 662 RIFHRESYQEWVREYVAKTLNGEYDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNR 721

Query: 719 KLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQFDE 778
           +  RPLQYQ  G I YVITVNGPEP E  +SP+DY HY++KQL+PVADAILPFI   F  
Sbjct: 722 RHDRPLQYQSGGWISYVITVNGPEPLENRRSPLDYNHYVEKQLQPVADAILPFIHDDFAT 781

Query: 779 LIAPQLGLF 787
           LI  Q+GLF
Sbjct: 782 LITGQMGLF 790