Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 13/219 (5%)

Query: 3   PRYLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPR 62
           PRY Q++  M+  I + RW  G   PTE  L  +F +S  TV KA+  LV+EG L+R+  
Sbjct: 11  PRYQQLRDHMVAQIANNRWRPGEAIPTEAALATEFDLSIGTVRKAVDVLVAEGVLERQQG 70

Query: 63  LGTFVCAAEEKAESPLLDIRNIADEILSRGKQY--HNKVVEQRALSADEAVAIKLGVMVG 120
            GTF+     + +S L           + G++    ++++   +L A  AVA  LG+   
Sbjct: 71  RGTFI--RRPQFQSSLFRFFRFE---AANGERIVPESRILSIESLPAPSAVAEALGLAGE 125

Query: 121 SPVFYSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDFTQITPNQYLSQNCPLSAI----E 176
           + V            P+  E  W+  ++    LD D     P  Y         +    E
Sbjct: 126 AEVIRIIRTRLLGAQPVLAEEIWLPRQTFQPLLDVDLNSEGPLLYPIYEALCGQVVAYAE 185

Query: 177 HTVEAIVADAHVKQALALAANEPCLLLNR--RTWSGDKL 213
            T+ A   DA   + L L A+ P +++ R  R ++G  L
Sbjct: 186 ETLTAEAVDAVHGRLLQLPADSPVVVIERLARDYAGKPL 224