Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Uncharacterized HTH-type transcriptional regulator YidP from Escherichia coli ECRC99

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 48/232 (20%), Positives = 110/232 (47%), Gaps = 16/232 (6%)

Query: 5   YLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPRLG 64
           Y  I + +   + S  + +    P E +L E+F VSRMT+ KA+  LV+ G + RR   G
Sbjct: 3   YKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRHGSG 62

Query: 65  TFVCAAEEKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVGSPVF 124
           T++   +   ++    +  + + +  +GK   ++V+    + A  A+A +L + +   ++
Sbjct: 63  TYLVRKDVLHQT--ASLTGLVEVLKRQGKTVTSQVLIFEIMPAPPAIASQLRIQINEQIY 120

Query: 125 YSEIIHYANDIPMQLE-----VRWVNSRSVPHYLDQDFTQITPNQYLSQNCP--LSAIEH 177
           +S  + +    P+ LE     V+   + S+ H     F      +Y+ Q C   +     
Sbjct: 121 FSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKF------EYIEQECGILIGGNYE 174

Query: 178 TVEAIVADAHVKQALALAANEPCLLLNRRTWS-GDKLVSSALLYHPGSRYKL 228
           ++  ++AD  + + + +A + P L +   ++S   + ++ ++++   S Y++
Sbjct: 175 SLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMFRNASEYQV 226