Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 8/229 (3%)

Query: 5   YLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPRLG 64
           Y  ++Q +LD+I  G +  G + PTE EL  Q+ VSR+T+ KA+ DLV++G L R    G
Sbjct: 13  YATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKG 72

Query: 65  TFVCAAEEKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVGSPVF 124
           TFV    +K E+ LL +    D  +S+GK    KV+EQ  +SA      KL +   S VF
Sbjct: 73  TFV--QSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSA-APFCEKLNIPGNSEVF 129

Query: 125 YSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDFTQITPNQYLSQ---NCPLSAIEHTVEA 181
           +   + Y +  P+ ++  W+     P + D+ + + +    L Q   +  + + + T++ 
Sbjct: 130 HLCRVMYLDKEPLFIDSSWIPLSRYPDF-DEIYVEGSSTYQLFQERFDTRVVSDKKTIDI 188

Query: 182 IVADAHVKQALALAANEPCLLLNRRTW-SGDKLVSSALLYHPGSRYKLS 229
             A     + L     EP   +++  +   DK V  + L+   +R  L+
Sbjct: 189 FAATRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITLT 237