Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., putative HTH-type transcriptional regulator YurK from Alteromonas macleodii MIT1002

 Score =  186 bits (471), Expect = 5e-52
 Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 44/276 (15%)

Query: 1   MSPRYLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRR 60
           M PRY  IK  +LD IESG    G + P+E +L +Q  VSRMT  +AL ++V EG L R 
Sbjct: 1   MQPRYRVIKTAILDAIESGEMKPGSQVPSENQLAQQHRVSRMTARRALSEMVDEGILMRS 60

Query: 61  PRLGTFVCAAEEKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVG 120
             +GTFV  ++ +  S +L+I++I DEI  RG +Y N+++      A +A+A +LG+ VG
Sbjct: 61  QGIGTFV--SDSRPMSSMLEIKSIRDEIEQRGHRYTNEILVLETSPASDAIAQRLGIDVG 118

Query: 121 SPVFYSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDFTQITPNQYLSQNCPLSAIEHTVE 180
            PVF+S I+H  N++P+Q E RWVN   +  YLD+DF   T N YL+Q  PLS  +H+VE
Sbjct: 119 EPVFHSIIVHCENNLPVQYEDRWVNPAWINDYLDKDFKAQTANFYLNQVAPLSQADHSVE 178

Query: 181 AIVADAHVKQALALAANEPCLLLNRRTW-------------------------------- 208
           A+V +  + QAL +   EPCL + RRT+                                
Sbjct: 179 AVVVEKDIAQALLIKPKEPCLKITRRTFSRVPSAITSDESNIGEPSTANAQLGNGLKATS 238

Query: 209 ----------SGDKLVSSALLYHPGSRYKLSSKILF 234
                     S   +VS A+LYHPGSRY+L   + F
Sbjct: 239 DTSVNNSPKASSSAVVSHAVLYHPGSRYRLGGHLEF 274