Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD from Variovorax sp. SCN45

 Score =  108 bits (270), Expect = 9e-28
 Identities = 121/498 (24%), Positives = 197/498 (39%), Gaps = 77/498 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTKGVVVDLS- 114
           + Y+  P AV  P++ A V  + K         V    RG GTG +G ++   + V LS 
Sbjct: 50  TAYRTRPLAVALPETEAQVAAVLKSCHALGVPVVA---RGAGTGLSGGAMPHPMGVTLSL 106

Query: 115 RHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASG 174
              NRIL+I+P      VQ GV    +++A  P G +++PD S+    T+GG V  ++ G
Sbjct: 107 AKFNRILKIDPVSRTAVVQCGVRNLAISEAAAPFGLYYAPDPSSQIACTIGGNVAENSGG 166

Query: 175 QGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQIV 234
              L+YG T  +VL ++   A+G             P  F ++A+               
Sbjct: 167 VHCLKYGLTLHNVLRVRGFTAEGE------------PVEFGSEALDCA------------ 202

Query: 235 AKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVN 294
                                     D+  ++ G+EG LA   E  + L P P+    + 
Sbjct: 203 ------------------------GLDLLPLIVGSEGMLAVTVEVTVKLVPKPQLARCIM 238

Query: 295 VKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQG 352
             +D    A      ++ A  +   +E +D K +  A ED +  +  DL       +   
Sbjct: 239 ASFDDVRKAGDAVAAVIAAGIIPAGLEMMD-KPMTAAVEDFV-RAGYDL-------DAAA 289

Query: 353 INMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVG 412
           I + E  G  S ++ +++ ++TA L      +  G     V +      + ++ RK A  
Sbjct: 290 ILLCESDG-TSEEVEEEIGRMTAVL------RDCGATAIAVSASEEERLKFWSGRKNAF- 341

Query: 413 LLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPAL 472
               A GR  P     D+ +P + LAD ++  + +     L      H   G LH     
Sbjct: 342 ---PASGRISPDYMCLDSTIPRKRLADILIAIQEMERKYGLRCVNVFHAGDGNLHPLILF 398

Query: 473 DLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRVK 530
           D  DP            +++     GG + GEHG G    +    +F  EE   ++  VK
Sbjct: 399 DANDPDDLHRCELFGADILETSVAMGGTVSGEHGVGVEKLNSMCVQFTAEE-NEQMFGVK 457

Query: 531 AAFDPHNKMNPGKICTPL 548
            AFDP   +NPGK+   L
Sbjct: 458 RAFDPAGLLNPGKVIPSL 475