Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD from Variovorax sp. SCN45

 Score =  107 bits (266), Expect = 3e-27
 Identities = 119/499 (23%), Positives = 198/499 (39%), Gaps = 79/499 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSL--TKGVVVDL 113
           + Y+  P  V  P++ A V  + K   +     V    RG GTG +G ++  T GV + L
Sbjct: 51  TAYRARPLVVALPETEAQVAAVLKTCHQLGVPVVA---RGAGTGLSGGAMPHTMGVTMSL 107

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           ++  NRIL+I+P      VQ GV    +++A  P   +++PD S+    T+GG V  ++ 
Sbjct: 108 AK-FNRILKIDPVSRTAVVQCGVRNLAISEAAAPFNLYYAPDPSSQIACTIGGNVAENSG 166

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  +VL ++   A+G  +E      L AP                      
Sbjct: 167 GVHCLKYGLTLHNVLRVRGFTAEGEAIEFG-GDALDAPG--------------------- 204

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                      D+  ++ G+EG LA  TE  + L P P+    +
Sbjct: 205 --------------------------LDLLALVIGSEGMLAVTTEVTVKLVPKPQLARCI 238

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +D    A      ++ A  +   +E +D K +  A ED +  +  DL       +  
Sbjct: 239 MASFDDVRKAGDAVAAVIAAGIIPAGLEMMD-KPMTAAVEDFV-RAGYDL-------DAA 289

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
            I + E  G    ++ +++ ++TA L      +  G       +      + ++ RK A 
Sbjct: 290 AILLCESDGTPE-EVEEEIGRMTAVL------RGCGATAITCSNSEEERMKFWSGRKNAF 342

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P     D+ +P + LAD ++  + +    +L      H   G LH    
Sbjct: 343 ----PASGRISPDYMCLDSTIPRKRLADILLAIQEMEKKYDLRCCNVFHAGDGNLHPLVL 398

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D  DP +          +++     GG + GEHG G    +    +F   E   ++  V
Sbjct: 399 FDANDPDELHRCELFGADILETSVAMGGTVSGEHGVGVEKLNSMCVQFTAAE-NEQMFGV 457

Query: 530 KAAFDPHNKMNPGKICTPL 548
           K AFDP   +NPGK+   L
Sbjct: 458 KRAFDPEGMLNPGKVIPTL 476