Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., glycolate oxidase, putative FAD-linked subunit from Pseudomonas putida KT2440

 Score =  128 bits (322), Expect = 9e-34
 Identities = 128/494 (25%), Positives = 199/494 (40%), Gaps = 79/494 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSL--TKGVVVDL 113
           S Y+ +P  V  P+    V  + K+  +     V    RG GTG +G +L   KG+++ +
Sbjct: 50  SAYRTVPLLVALPERLEQVQTLLKLCHQ---RGVPVVARGAGTGLSGGALPLAKGILLVM 106

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           +R  NRILE+NPQ  + RVQ GV    ++ A  PHG +++PD S+    ++GG V  +A 
Sbjct: 107 AR-FNRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNVAENAG 165

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  +VL +  +  +G  L    S  L +P                      
Sbjct: 166 GVHCLKYGLTVHNVLKVDILTVEGERLSLG-SDALDSPG--------------------- 203

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                     FD+  +  G+EG L  +TE  + L P P+   ++
Sbjct: 204 --------------------------FDLLALFIGSEGMLGIVTEVTVKLLPKPQVARVI 237

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +DS + A R    ++ A  +   +E +D+  +  A ED I          +   E+ 
Sbjct: 238 LASFDSVEDAGRAVADIIAAGIIPGGLEMMDNLAIR-AAEDFIHAGYPVDAAAILLCELD 296

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
           G+          A +     ++ A L       QAG     +  D A   R +  RK A 
Sbjct: 297 GV---------EADVYDDCERVAAVL------TQAGAREVHLACDEAERARFWAGRKNAF 341

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P  +  D  +P   L   +     L     L      H   G +H    
Sbjct: 342 ----PAVGRISPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLIL 397

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D   P +      I  ++++L  K GG + GEHG G    ++   +F  +E+ T    V
Sbjct: 398 FDANLPGELERAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEI-TLFHAV 456

Query: 530 KAAFDPHNKMNPGK 543
           KAAFDP   +NPGK
Sbjct: 457 KAAFDPQGLLNPGK 470