Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., glycolate oxidase subunit GlcD from Escherichia coli ECRC62

 Score =  119 bits (298), Expect = 5e-31
 Identities = 126/494 (25%), Positives = 204/494 (41%), Gaps = 79/494 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLT--KGVVVDL 113
           S Y+  P  VV PK    V  I  +  +     VT   RG GTG +G +L   KGV++ +
Sbjct: 50  SAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVT---RGAGTGLSGGALPLEKGVLLVM 106

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           +R    IL+INP     RVQ GV    ++ AV PH  +++PD S+    ++GG V  +A 
Sbjct: 107 AR-FKEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAG 165

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  ++L ++    DG  L T  S  L +P                      
Sbjct: 166 GVHCLKYGLTVHNLLKIEVQTLDGEAL-TLGSDALDSPG--------------------- 203

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                     FD+  +  G+EG L   TE  + L P P    ++
Sbjct: 204 --------------------------FDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVL 237

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +DS + A      ++    +   +E +D+  +  A++ I  H+   +       + +
Sbjct: 238 LASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFI--HAGYPV-------DAE 288

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
            I + E  G +S      V +   R+++++   +AG    ++  D A   R +  RK A 
Sbjct: 289 AILLCELDGVES-----DVQEDCERVNDILL--KAGATDVRLAQDEAERVRFWAGRKNAF 341

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P  +  D  +P   L   +     L    +L      H   G +H    
Sbjct: 342 ----PAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLIL 397

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D  +P +     E+  ++++L  + GG + GEHG G    ++   +F  +E+ T    V
Sbjct: 398 FDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEI-TTFHAV 456

Query: 530 KAAFDPHNKMNPGK 543
           KAAFDP   +NPGK
Sbjct: 457 KAAFDPDGLLNPGK 470