Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 6e-21
 Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 15  LSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERRKHALIGAAGGAA 74
           L+GC   Q+ +  T           A +G + GAA+G AT   A       LIG   GA 
Sbjct: 17  LTGCAGLQKTDWPTC----------AAIGGVTGAAIG-ATESSAYAGAGALLIGGMAGAY 65

Query: 75  V---------GGGIGYYFDQQEAELRKALLDSG-----------VQVVRVGENQLMLRME 114
                     G G+    D+     +   +D+             +V+ V E  +++R  
Sbjct: 66  CWVHGDGDEDGDGVPDSRDKCPGTPKGVQVDANGCPPTPPPAVVEEVLVVKEETIVIR-- 123

Query: 115 NGIGFTSNSYQLDSYIHKTLRGVA-RILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAE 173
             + F  +S +L +     L  +A R+  E P   L + GHTDS G+D  NQ LS+KRA 
Sbjct: 124 -DVHFQFDSAKLTAADKTNLDTIATRLKQEAPTAQLRVSGHTDSVGNDAYNQKLSDKRAH 182

Query: 174 SVRSFLLSQGVAAGRAIA-RGNGERFPLCSNNTAEGRACNRRVEIQI 219
           SV  +L+  GV     ++  G GE  P+  N TAEGRA NRR EIQI
Sbjct: 183 SVTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEIQI 229