Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Outer membrane porin, OmpA family from Sphingobium sp. HT1-2

 Score =  154 bits (389), Expect = 1e-42
 Identities = 90/214 (42%), Positives = 122/214 (57%), Gaps = 7/214 (3%)

Query: 9   LAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERRKHALIG 68
           LAA++  + C      +  TG+   +    G + G L G  +G   G   +  R   ++G
Sbjct: 13  LAAMLTTTACTT----DPETGQKRMSKAAIGGIGGALGGYLLGDLVG--GRHDRTEKILG 66

Query: 69  AAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSNSYQLDS 128
           A  GA  G GIG Y D+QE +LR+    SGV V+R G++ L+LRM +GI F  N   +  
Sbjct: 67  AGIGAIAGAGIGSYMDEQERKLRQQTAGSGVDVIRQGDD-LLLRMPSGITFAFNDASVQP 125

Query: 129 YIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQGVAAGR 188
               TL  V+ IL +YP T + + GHTDS GSD  NQ LSE+RA+SV  +L S GV + R
Sbjct: 126 QFRPTLDEVSSILSQYPKTYIDVYGHTDSDGSDAYNQTLSERRAQSVAGYLTSHGVQSAR 185

Query: 189 AIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
              RG GE  P+ SN T EG+A NRRVEI+I P+
Sbjct: 186 IATRGFGETQPIASNATEEGKAANRRVEIKISPV 219