Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., OmpA family lipoprotein from Pantoea agglomerans CFBP13505 P0401

 Score =  181 bits (459), Expect = 1e-50
 Identities = 106/217 (48%), Positives = 140/217 (64%), Gaps = 6/217 (2%)

Query: 6   TLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERRKHA 65
           TLLL+  +AL GC      N  TGE++   +  GA LG L GA VG+ +    K+RRK A
Sbjct: 9   TLLLSGSLALPGCTT----NPYTGESQAGKSGVGAGLGALVGAGVGVLSSSK-KDRRKGA 63

Query: 66  LIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSNSYQ 125
           LIGAAGGAA+GGG+GYY D QEA+LR  +  +GV V R G+N ++L M N + F S+S  
Sbjct: 64  LIGAAGGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRNGDN-IVLNMPNNVTFDSSSSN 122

Query: 126 LDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQGVA 185
           L      TL GV+ +L EYP T++ + G+TDSTG+   N  LS++RAESV S L+ QGVA
Sbjct: 123 LKPAGANTLTGVSMVLKEYPKTAVNVVGYTDSTGTRALNMRLSQQRAESVASALIVQGVA 182

Query: 186 AGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
           + R   +G G   P+ SN+T  G+A NRRVEI + PL
Sbjct: 183 SDRLRTQGAGPDNPVASNSTEAGKAQNRRVEITLSPL 219