Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., Outer membrane protein A precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  179 bits (453), Expect = 5e-50
 Identities = 107/226 (47%), Positives = 141/226 (62%), Gaps = 10/226 (4%)

Query: 2   LNKTTLLLAAVV----ALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDD 57
           + K   ++AA+V    A+SGC      N  TGE E   +  GA +G L GA +G A    
Sbjct: 1   MKKRVFVIAAIVSGALAVSGCTT----NPYTGEREAGKSGIGAGIGSLVGAGIG-ALSSS 55

Query: 58  AKERRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGI 117
            K+R K ALIGAA GAA+GGG+GYY D QEA+LR  +  +GV V R G+N ++L M N +
Sbjct: 56  KKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDN-IILNMPNNV 114

Query: 118 GFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRS 177
            F S+S  L      TL GVA +L EYP T++ + G+TDSTGS   N  LS++RA+SV S
Sbjct: 115 TFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVAS 174

Query: 178 FLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPLK 223
            L++QGV A R    G G   P+ SN+TAEG+A NRRVEI + PL+
Sbjct: 175 SLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSPLQ 220