Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., predicted outer membrane lipoprotien (NCBI) from Escherichia coli BW25113

 Score =  179 bits (455), Expect = 3e-50
 Identities = 109/225 (48%), Positives = 140/225 (62%), Gaps = 10/225 (4%)

Query: 2   LNKTTLLLAAVV----ALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDD 57
           + K   L+AAVV    A+SGC      N  TGE E   +  GA LG L GA +G A    
Sbjct: 1   MKKRVYLIAAVVSGALAVSGCTT----NPYTGEREAGKSAIGAGLGSLVGAGIG-ALSSS 55

Query: 58  AKERRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGI 117
            K+R K ALIGAA GAA+GGG+GYY D QEA+LR  +  +GV V R G+N ++L M N +
Sbjct: 56  KKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDN-IILNMPNNV 114

Query: 118 GFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRS 177
            F S+S  L      TL GVA +L EYP T++ + G+TDSTG    N  LS++RA+SV S
Sbjct: 115 TFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVAS 174

Query: 178 FLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
            L++QGV A R   +G G   P+ SN+TAEG+A NRRVEI + PL
Sbjct: 175 ALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 219