Pairwise Alignments
Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056
Subject, 887 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 58.2 bits (139), Expect = 8e-13
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 19 WLFLLFS-LPLAAADDVTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSA 77
W+ LL +P V + Q AQ+Q AQ LA Y G Q+ +A W ++A
Sbjct: 237 WMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVLASAYMLGLGVRQDARQALEWARKAA 296
Query: 78 ELNHPPAMAQVANAYLTGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWY 128
+ A A + YL G GV+KD QA W K GNP L + Y
Sbjct: 297 DAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFRKAVEGGNPMGQWALGRLY 347
Score = 53.5 bits (127), Expect = 2e-11
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 23 LFSLPLAAADDVTRLTQLAQEQNPQ----AQYQLALTYQTGSSTPQNLNEAFYWFLQSAE 78
L++ + A D T +L +E Q AQ +L G ++ EA W+ ++AE
Sbjct: 346 LYATGVGVAKDETEAARLFREAADQGLAEAQAELGTALADGRGVAKDEAEAVRWYRRAAE 405
Query: 79 LNHPPAMAQVANAYLTGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAAL 138
H A + Y G GVE+D QA +W K A G+ L YE+
Sbjct: 406 QGHVEAQNDLGYRYWEGLGVERDVAQAVHWFRKSAATGDATGKFNLGVPYERGEGVPRDY 465
Query: 139 DLAEIWYRVNANQ 151
A WYR A Q
Sbjct: 466 GEALRWYREAAEQ 478
Score = 52.4 bits (124), Expect = 5e-11
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 39 QLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGV 98
+ A++ +A L Y+ G + +A W+ Q+AE A +A+ Y G+GV
Sbjct: 474 EAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRWYRQAAERGLATAQNNLADMYARGRGV 533
Query: 99 EKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQDPESEQG 158
KD +A W K A G+ +A L Y + +A W+R A EQG
Sbjct: 534 SKDDAEAVRWRRKAAEQGHAEAQDELGHAYSEGKGVQQDDTMAVTWFRKAA------EQG 587
Query: 159 YAR 161
YAR
Sbjct: 588 YAR 590
Score = 52.0 bits (123), Expect = 6e-11
Identities = 31/101 (30%), Positives = 45/101 (44%)
Query: 46 PQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQA 105
P+AQ+ G PQ++N W Q+A+ A + +A+AY+ G GV +D QA
Sbjct: 229 PEAQFLKGWMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVLASAYMLGLGVRQDARQA 288
Query: 106 QYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYR 146
W K A AG A + Y + L A W+R
Sbjct: 289 LEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFR 329
Score = 49.3 bits (116), Expect = 4e-10
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 49 QYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQAQYW 108
++ L + Y+ G P++ EA W+ ++AE AM + + Y G GV+ D +QA W
Sbjct: 448 KFNLGVPYERGEGVPRDYGEALRWYREAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRW 507
Query: 109 LIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQDPESEQGYARLLEQ 165
+ A G A LA Y + ++ D + +R A +EQG+A ++
Sbjct: 508 YRQAAERGLATAQNNLADMYAR-GRGVSKDDAEAVRWRRKA-----AEQGHAEAQDE 558
Score = 49.3 bits (116), Expect = 4e-10
Identities = 33/114 (28%), Positives = 47/114 (41%)
Query: 39 QLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGV 98
Q A+ AQ LA Y G ++ EA W ++AE H A ++ +AY G+GV
Sbjct: 510 QAAERGLATAQNNLADMYARGRGVSKDDAEAVRWRRKAAEQGHAEAQDELGHAYSEGKGV 569
Query: 99 EKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQD 152
++D A W K A G + L + Y A WYR Q+
Sbjct: 570 QQDDTMAVTWFRKAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKAVEQN 623
Score = 48.1 bits (113), Expect = 9e-10
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 31 ADDVTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVAN 90
A+ V + A++ + +AQ +L Y G Q+ A WF ++AE + +
Sbjct: 538 AEAVRWRRKAAEQGHAEAQDELGHAYSEGKGVQQDDTMAVTWFRKAAEQGYARGQNNLGR 597
Query: 91 AYLTGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWY 128
AY GQGVE+D QA +W K + A L Y
Sbjct: 598 AYHNGQGVERDYAQAAHWYRKAVEQNHAVATGNLGTLY 635
Score = 47.8 bits (112), Expect = 1e-09
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 34 VTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYL 93
VT + A++ + Q L Y G ++ +A +W+ ++ E NH A + Y
Sbjct: 577 VTWFRKAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKAVEQNHAVATGNLGTLYR 636
Query: 94 TGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWY 128
G GV KDP +A L + A G+ A L Y
Sbjct: 637 YGTGVTKDPERASQLLRQAADGGHVSAMANLGTMY 671
Score = 45.8 bits (107), Expect = 4e-09
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 45 NPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQ 104
NP Q+ L Y TG ++ EA F ++A+ A A++ A G+GV KD +
Sbjct: 336 NPMGQWALGRLYATGVGVAKDETEAARLFREAADQGLAEAQAELGTALADGRGVAKDEAE 395
Query: 105 AQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNA 149
A W + A G+ +A L Y + + A W+R +A
Sbjct: 396 AVRWYRRAAEQGHVEAQNDLGYRYWEGLGVERDVAQAVHWFRKSA 440
Score = 42.0 bits (97), Expect = 6e-08
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 48 AQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQAQY 107
AQ + Y GS ++L +A WF ++ E +P + Y TG GV KD +A
Sbjct: 303 AQALIGTLYLEGSGVDKDLGQAVSWFRKAVEGGNPMGQWALGRLYATGVGVAKDETEAAR 362
Query: 108 WLIKLALAGNPQAGTTLAKWYEQHPTAIA-----ALDLAEI--WYRVNANQ---DPESEQ 157
+ A G +A L TA+A A D AE WYR A Q + +++
Sbjct: 363 LFREAADQGLAEAQAELG-------TALADGRGVAKDEAEAVRWYRRAAEQGHVEAQNDL 415
Query: 158 GY 159
GY
Sbjct: 416 GY 417
Score = 42.0 bits (97), Expect = 6e-08
Identities = 31/121 (25%), Positives = 50/121 (41%)
Query: 31 ADDVTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVAN 90
A+ V + A++ + +AQ L Y G +++ +A +WF +SA +
Sbjct: 394 AEAVRWYRRAAEQGHVEAQNDLGYRYWEGLGVERDVAQAVHWFRKSAATGDATGKFNLGV 453
Query: 91 AYLTGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNAN 150
Y G+GV +D +A W + A G +A L YE A WYR A
Sbjct: 454 PYERGEGVPRDYGEALRWYREAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRWYRQAAE 513
Query: 151 Q 151
+
Sbjct: 514 R 514
Score = 40.8 bits (94), Expect = 1e-07
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 36 RLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQV 88
R A++ + +AQ++LA YQ+G T ++ +A W +SA+ HP AM V
Sbjct: 40 RQLDAAEQGDAEAQWRLAHAYQSGYGTRKDARKAAQWMRRSADQGHPSAMTDV 92
Score = 35.8 bits (81), Expect = 4e-06
Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 23/202 (11%)
Query: 37 LTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTG- 95
L + A+ A++ L Y G PQ+ +A +W ++ H A+ +A +L G
Sbjct: 148 LERAAESGVVNAEFNLGSRYMHGEDVPQDGQKAAFWLGRAHAQQHVWALVMLAVLHLDGT 207
Query: 96 --------------QGVEKDPLQAQY---WLIKLALAGNPQAGTTLAKWYE---QHPTAI 135
QG+++ +AQ+ W++ L G PQ +W Q A
Sbjct: 208 LMPKNGALALKLVQQGMDRGLPEAQFLKGWMLLLG-EGVPQDVNVGVRWIRQAAQQQVAA 266
Query: 136 AALDLAEIW-YRVNANQDPESEQGYARLLEQKFNQQRERQLNSIGQLDNLIDRDLARPAS 194
A LA + + QD +AR + + ++ + +D+DL + S
Sbjct: 267 AQSVLASAYMLGLGVRQDARQALEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVS 326
Query: 195 ALPVNKEAQTITSDWLLPTLVA 216
E W L L A
Sbjct: 327 WFRKAVEGGNPMGQWALGRLYA 348
Score = 35.0 bits (79), Expect = 8e-06
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 47 QAQYQLALTYQTGSSTPQNLNEA-------FYWFLQSAELNHPPAMAQVANAYLTGQGVE 99
Q Q + TGS + L + F L +AE A ++A+AY +G G
Sbjct: 8 QGQREAVPALGTGSPDLERLRQQHESPEAYFQRQLDAAEQGDAEAQWRLAHAYQSGYGTR 67
Query: 100 KDPLQAQYWLIKLALAGNPQAGT 122
KD +A W+ + A G+P A T
Sbjct: 68 KDARKAAQWMRRSADQGHPSAMT 90
Score = 32.7 bits (73), Expect = 4e-05
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 41 AQEQNPQ-AQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVE 99
A EQN A L Y+ G+ ++ A Q+A+ H AMA + YL G+G+
Sbjct: 619 AVEQNHAVATGNLGTLYRYGTGVTKDPERASQLLRQAADGGHVSAMANLGTMYLNGEGIP 678
Query: 100 KDPLQAQYWLIKLALAGNPQ 119
++ +A + A G+ Q
Sbjct: 679 RNEQEALRFFRLAADRGSAQ 698
Score = 27.3 bits (59), Expect = 0.002
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 23 LFSLPLAAADD---VTRLTQLAQEQNPQAQYQ-LALTYQTGSSTPQNLNEAFYWFLQSAE 78
+FS+ A D RL +LA Q A L ++ G PQ+ EA + Q+ +
Sbjct: 706 MFSMGWGVAKDQKEAARLYRLAGAQGQVAALNNLGYLHELGEGVPQDHTEAVRLYRQAFD 765
Query: 79 LNHPPAMAQVANAYLTGQGVEKDPLQA 105
+ A A + G+G +D +A
Sbjct: 766 RGYLWAGANLGEMMAYGRGTPRDMAEA 792