Pairwise Alignments

Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 37  LTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQ 96
           L  LA+  +  AQY +AL Y  G   PQ+  ++ YW+ ++A+     A   V   Y  G+
Sbjct: 54  LRPLAESGDKDAQYHIALIYSNGYGIPQDYEKSSYWYRKAADQGLVNAQIVVGFGYYLGR 113

Query: 97  -GVEKDPLQAQYWLIKLALAGN 117
            G  KD + +  WL   A  GN
Sbjct: 114 WGFSKDYVLSHMWLSLAASQGN 135



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 46/200 (23%), Positives = 66/200 (33%), Gaps = 52/200 (26%)

Query: 17  SLWLFLLFSLPLAAADDVTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQS 76
           S W+  L    L    ++   T    E   +A       Y+ G  T     E+ Y     
Sbjct: 10  SSWVSFLAGAFLLGTGEIATATAGQLEDGVEA-------YKLGKYT-----ESIYILRPL 57

Query: 77  AELNHPPAMAQVANAYLTGQGVEKDPLQAQYWLIKLALAGNPQA------GTTLAKWYEQ 130
           AE     A   +A  Y  G G+ +D  ++ YW  K A  G   A      G  L +W   
Sbjct: 58  AESGDKDAQYHIALIYSNGYGIPQDYEKSSYWYRKAADQGLVNAQIVVGFGYYLGRWGFS 117

Query: 131 HPTAIAALDLAEIWYRVNANQDPESEQGYARLLEQKFNQQRERQLNSIGQLDNLIDRD-L 189
                    L+ +W  + A+Q                           G +D   +RD L
Sbjct: 118 KDYV-----LSHMWLSLAASQ---------------------------GNIDGANERDRL 145

Query: 190 ARPASALPVNKEAQTITSDW 209
           AR  S   + K AQ +  DW
Sbjct: 146 ARRMSPAEIAK-AQKLARDW 164