Pairwise Alignments

Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 722 a.a., FIG01057005: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 30/92 (32%), Positives = 44/92 (47%)

Query: 37  LTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQ 96
           LTQ A++ +P A   LA  Y  G    Q+  +   +  ++AEL    A  +V    L G+
Sbjct: 591 LTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGE 650

Query: 97  GVEKDPLQAQYWLIKLALAGNPQAGTTLAKWY 128
           G+ K+  +A  W+ K A  GN QA   L   Y
Sbjct: 651 GMPKNLPEAYKWIKKSADQGNAQAHYNLGLMY 682



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 35  TRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLT 94
           T +T  A++ +  AQY L   Y+   +   N + A  W  QSAE NHP A+  +A AY  
Sbjct: 557 TDVTNKAKQGDSTAQYHLG-KYEFECT---NYDAAMKWLTQSAEQNHPGALLFLAYAYND 612

Query: 95  GQGVEKDPLQAQYWLIKLALAGNPQA 120
           G GV +D  +   +L K A  G   A
Sbjct: 613 GDGVAQDSKKYLSYLFKAAELGESDA 638



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 24/80 (30%), Positives = 36/80 (45%)

Query: 37  LTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQ 96
           L + A+     AQ ++      G   P+NL EA+ W  +SA+  +  A   +   Y  G 
Sbjct: 627 LFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGD 686

Query: 97  GVEKDPLQAQYWLIKLALAG 116
           GVEKD  +A+  L      G
Sbjct: 687 GVEKDLNKAKLHLTAAVKGG 706



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 41  AQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMA 86
           A + N QA Y L L Y+ G    ++LN+A      + +    PA+A
Sbjct: 667 ADQGNAQAHYNLGLMYRNGDGVEKDLNKAKLHLTAAVKGGVKPALA 712