Pairwise Alignments

Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., conserved outer membrane protein (NCBI) from Escherichia coli BW25113

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 5/128 (3%)

Query: 25  SLPLAAADDVTRLTQLAQEQNPQAQYQLALTYQTGSS-TPQNLNEAFYWFLQSAELNHPP 83
           SLP   A   T L+ +    +  +QY+L   Y  GS   P +  +A YW+ QSAE  +P 
Sbjct: 46  SLPFTTA--ATELSAI--HGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPR 101

Query: 84  AMAQVANAYLTGQGVEKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEI 143
           A +++   YL G GV+ D  +A  W  + A  G   A  TL   Y            ++ 
Sbjct: 102 AQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQK 161

Query: 144 WYRVNANQ 151
           W ++ A Q
Sbjct: 162 WLKLTAKQ 169