Pairwise Alignments

Query, 254 a.a., vancomycin high temperature exclusion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., outer membrane permeability protein SanA from Erwinia tracheiphila SCR3

 Score =  214 bits (544), Expect = 2e-60
 Identities = 111/209 (53%), Positives = 145/209 (69%), Gaps = 3/209 (1%)

Query: 28  RKLSQTLLWLTIGVVAGLLAIDRWVSWQTQNNIINDAQNTPPFQVAVVLGTSKYIGKT-L 86
           ++L   L+ + I + A  LA+DRW+S +T   + +  ++ P  QV VVLGT+KY     +
Sbjct: 3   KRLIYGLIIIVILLAASALALDRWISAKTVPWVYSSLKSLPHRQVGVVLGTAKYYRSGGI 62

Query: 87  NEYYTNRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAG 146
           N+YY  RI  A+  Y  GKV   LLSGDNA  SYNEP TM+RDL+ AG+P  +I LDYAG
Sbjct: 63  NQYYLYRIQGALNAYNSGKVNYLLLSGDNAQHSYNEPVTMRRDLIAAGVPPSDIVLDYAG 122

Query: 147 FRTLDSIVRAKEIFDTDNFLIITQRFHCERALFIARYQDIQASCLAVPGPSNHSGFKVRL 206
           FRTLDSIVR +++FDT++F+IITQRFHCERALFIA +  IQA C AVP P N     +RL
Sbjct: 123 FRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIAMHMGIQAQCYAVPSPKNM--LNIRL 180

Query: 207 REVFARAYAVFDLFVLDTQPKFLGPKEPI 235
           REV AR  A+ DL+++  +P+FLGP  PI
Sbjct: 181 REVGARLGALTDLYLMKREPRFLGPMVPI 209