Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  110 bits (274), Expect = 2e-28
 Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 9/201 (4%)

Query: 228 AVAGAWLSALEIRRNRREVLRARMRQEHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHG 287
           ++A A ++A  +  N     R + R   L+  N  L  Q       A  DALTG +NRHG
Sbjct: 374 SLALAGMTAKLVSANAELEQRVKERTAALETANAELDRQ-------ARFDALTGLLNRHG 426

Query: 288 IRDWLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDLLREFALVISREIRESD 347
           + + LQ    +       + ++ IDID+FK VND +GH+ GD +L+  A ++   +R+SD
Sbjct: 427 MEERLQQALAVSNPDTAPLGIVMIDIDHFKSVNDRFGHATGDLVLKAVAGLMKSRLRKSD 486

Query: 348 KLVRWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGGAITCSIGIAQM--GDERI 405
              R GGEEFV+        +A++ A  L   + +      G IT S G++QM   D+ +
Sbjct: 487 IAARLGGEEFVLMLPGANAAEAMQTATDLVRLVGEAFIDPVGHITISCGVSQMLREDDSV 546

Query: 406 TETVSRADEALYRAKRLGRNR 426
              + RAD+ALY AK LGRNR
Sbjct: 547 ASALRRADKALYAAKSLGRNR 567