Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

 Score =  107 bits (266), Expect = 1e-27
 Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 21/200 (10%)

Query: 232 AW-LSALEIRRNRREVLRARMRQEHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRD 290
           AW   A E++R    +    + QE + RLN             A  D LTG  NR     
Sbjct: 359 AWYFEAAELKRAL--LFSLNLLQERIGRLNRD-----------AQTDPLTGLGNRRS--- 402

Query: 291 WLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDLLREFALVISREIRESDKLV 350
            L+    L+  +    + + +DID+FK++ND +GH +GD +LR+ A ++ R  RE D L 
Sbjct: 403 -LEISLSLLEAEKREFAAIALDIDHFKRINDSHGHDVGDQVLRQLAELMRRCCREGDLLC 461

Query: 351 RWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGGAITCSIGIAQMGDERITETVS 410
           R GGEEF++     TL  A  +AERLR  + +      GA+T S+G+     E   E +S
Sbjct: 462 RTGGEEFLILLPGATLNVAAAVAERLRVTVQEMPVESVGAVTISLGVTHWDGETHGEPMS 521

Query: 411 ---RADEALYRAKRLGRNRI 427
               AD ALYRAK+ GRNR+
Sbjct: 522 ALGEADRALYRAKQEGRNRV 541