Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  108 bits (271), Expect = 2e-28
 Identities = 65/160 (40%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 272 EMAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDL 331
           + A RD LTGA NR  +   LQ +  + R     +SVL +DID+FK+VND +GH  GD++
Sbjct: 145 QSALRDPLTGAGNRVAMEQTLQREIDMSRRHAQPLSVLMLDIDHFKRVNDDHGHGAGDEV 204

Query: 332 LREFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGG-- 389
           LR  A  I  ++R  D + R+GGEEF++  + T  E A  + ERLR       +   G  
Sbjct: 205 LRAIAASIKAQLRNVDMVFRYGGEEFLILLSNTGREAAAMVGERLRQATQSEEYFADGQL 264

Query: 390 -AITCSIGIAQ-MGDERITETVSRADEALYRAKRLGRNRI 427
             IT S+G +  +  E     + RAD ALY AKR GRNR+
Sbjct: 265 IEITVSLGCSTLLPGESADSLLRRADSALYVAKREGRNRL 304