Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  116 bits (290), Expect = 2e-30
 Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 5/192 (2%)

Query: 240 RRNRREVLRARMRQ--EHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQAR 297
           R +  E+L   + +  E L   N  L     +  ++A  D LTG  +R  I +  Q Q  
Sbjct: 263 RSHELEILNLELTKAVEALAASNAELVAAREELEQLAQHDNLTGTWSRRRIEESAQ-QEM 321

Query: 298 LVRWQLNH-VSVLFIDIDYFKQVNDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEE 356
           L + +  H VS++FID+D+FK+VND +GH+ GD++L+ F  +  + +R +D L RWGGEE
Sbjct: 322 LRKTRYGHPVSLIFIDLDHFKKVNDGHGHAAGDEVLKTFCDIAQKCMRSTDLLGRWGGEE 381

Query: 357 FVVFCAQTTLEQAIELAERLRAKIADHSWIHGGAITCSIGIAQMGDERITET-VSRADEA 415
           FV+    + L  AI LAER+R  I  + +   G +T S G+A+  +E   E+ + R+D A
Sbjct: 382 FVIVTPNSGLMIAILLAERIRKAIMAYEFQGIGHVTASFGVAEYREEETWESWLCRSDAA 441

Query: 416 LYRAKRLGRNRI 427
           LY AK  GRNR+
Sbjct: 442 LYAAKEGGRNRV 453