Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  117 bits (293), Expect = 1e-30
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 5/192 (2%)

Query: 240 RRNRREVLRARMRQ--EHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQAR 297
           R +  EVL   + +  E L   N  L     +   +A  D LTGA +R  I + ++ Q  
Sbjct: 263 RSHELEVLNLELTKAVEALAASNAELVAAREELEHLARHDTLTGAWSRSRIEESVR-QEM 321

Query: 298 LVRWQLNH-VSVLFIDIDYFKQVNDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEE 356
           L   +  H VS++FID+D+FK++ND YGH++GD++L+ F  +  + +R +D L RWGGEE
Sbjct: 322 LRNSRYGHPVSLIFIDLDHFKRINDGYGHAVGDEVLKSFCDIAQKCMRSTDLLGRWGGEE 381

Query: 357 FVVFCAQTTLEQAIELAERLRAKIADHSWIHGGAITCSIGIAQMGDERITET-VSRADEA 415
           FV+    + L  AI LAER+R  +  + +   G +T S G+A+  +    E+ + R+D A
Sbjct: 382 FVIVTPNSGLMIAILLAERIRKAVMAYDFPVAGHVTASFGVAEYRENETWESWLCRSDAA 441

Query: 416 LYRAKRLGRNRI 427
           LY AK  GRNR+
Sbjct: 442 LYAAKEGGRNRV 453